RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CCDC50Q8IVM0 306 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 VSTM4Q8IW00 320 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 MTURNQ8N3F0 131 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SYT14Q8NB59 555 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 OR1B1Q8NGR6 318 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 RFESDQ8TAC1 157 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 C11orf45Q8TAV5 145 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ADIPOR1Q96A54 375 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 DNAJA3Q96EY1 480 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SH3YL1Q96HL8 342 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ART5Q96L15 291 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 AMDHD1Q96NU7 426 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CASD1Q96PB1 797 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 RBM14Q96PK6 669 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 HSD17B14Q9BPX1 270 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 C19orf43Q9BQ61 176 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC77Q9BR77 488 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 TSSK1BQ9BXA7 367 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 PKIBQ9C010 78 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 TRIM9Q9C026 710 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 FAM192AQ9GZU8 254 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 POLR3FQ9H1D9 316 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SGK2Q9HBY8 427 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 POLE4Q9NR33 117 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ABCC13Q9NSE7 274 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 STARD5Q9NSY2 213 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ZDHHC18Q9NUE0 388 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 UFSP2Q9NUQ7 469 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 MRPL39Q9NYK5 338 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 AIPL1Q9NZN9 384 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 THEGQ9P2T0 379 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 MBD2Q9UBB5 411 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CACNG5Q9UF02 275 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CIDEBQ9UHD4 219 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 RARRES3Q9UL19 164 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 BARX2Q9UMQ3 279 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 EIF3LQ9Y262 564 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 EXOSC1Q9Y3B2 195 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ALG6Q9Y672 507 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 GRIN2DO15399 1336 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 IGHV3-38A0A0C4DH36 116 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TRBV5-4A0A0C4DH59 114 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TRBV7-9A0A0J9YWB2 115 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 A0A1B0GVL5 298 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 FAM240BA0A1B0GVZ2 78 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 XKRY2A2RUG3 117 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 BTBD17A6NE02 478 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 OR6C65A6NJZ3 312 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 IFITM10A6NMD0 228 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ARHGEF33A8MVX0 844 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 A8MXK9 166 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ERVV-2B6SEH9 535 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 PDLIM1O00151 329 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 FCN1O00602 326 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 LRRTM2O43300 516 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 MED7O43513 233 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 KLHL41O60662 606 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TOXO94900 526 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 JCHAINP01591 159 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 IGLV1-44P01699 117 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 AMBPP02760 352 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 HBQ1P09105 142 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 UQCRFS1P1P0C7P4 283 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TRIM49P0CI25 452 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TRIM49CP0CI26 452 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC130P13994 396 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CPN1P15169 458 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SELEP16581 610 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF26P17031 533 aaPredicted RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SDC1P18827 310 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TPSB2P20231 275 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 NT5EP21589 574 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ANOS1P23352 680 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CCNCP24863 283 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 HMGB2P26583 209 aaKnown RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 LAP3P28838 519 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 GRIA1P42261 906 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 MAGEA8P43361 318 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 BDKRB1P46663 353 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TDO2P48775 406 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ARHGDIAP52565 204 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 NDUFV3P56181 108 aaKnown RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 RPS6P62753 249 aaKnown RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 GNB1P62873 340 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CCNA1P78396 465 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 PEX6Q13608 980 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CRMP1Q14194 572 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF146Q15072 292 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 NECTIN1Q15223 517 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TPSAB1Q15661 275 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CD226Q15762 336 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ZIC1Q15915 447 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SSX2Q16385 188 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CYBRD1Q53TN4 286 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 HSP90AB3PQ58FF7 597 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 FAM219BQ5XKK7 198 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 WDR25Q64LD2 544 aaPredicted RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 OR8G2PQ6IF36 304 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 GDPGP1Q6ZNW5 385 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms