RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	BCAS1	O75363	584 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SERPINB7	O75635	380 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	IGFBP1	P08833	259 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC35E2	P0CK97	266 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	RNH1	P13489	461 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ITGA2	P17301	1181 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CBL	P22681	906 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CRHBP	P24387	322 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ELAVL4	P26378	380 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SSTR4	P31391	388 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	TRHR	P34981	398 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	GPR3	P46089	330 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	RPL5	P46777	297 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ALDH3B2	P48448	385 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	GSS	P48637	474 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ARRB1	P49407	418 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	RNF144A	P50876	292 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	RPP38	P78345	283 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	HSD11B2	P80365	405 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	IGLV3-21	P80748	117 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	HPCA	P84074	193 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	PSG6	Q00889	435 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	PLAUR	Q03405	335 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	NPRL3	Q12980	569 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC13A2	Q13183	592 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CDK5R2	Q13319	367 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SMN1	Q16637	294 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	FAM214A	Q32MH5	1076 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	INAVA	Q3KP66	663 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ARHGAP11B	Q3KRB8	267 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	LINC01559	Q495D7	138 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	KCTD21	Q4G0X4	260 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF311	Q5JNZ3	666 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	C6orf141	Q5SZD1	244 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	THOC7	Q6I9Y2	204 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	LHFPL2	Q6ZUX7	228 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	TTLL10	Q6ZVT0	673 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	D2HGDH	Q8N465	521 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF555	Q8NEP9	628 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR4N2	Q8NGD1	307 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR51Q1	Q8NH59	317 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC7A13	Q8TCU3	470 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF675	Q8TD23	568 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	PHF10	Q8WUB8	498 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	FBLIM1	Q8WUP2	373 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SNRNP27	Q8WVK2	155 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	GTPBP3	Q969Y2	492 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZDHHC12	Q96GR4	267 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	TRNT1	Q96Q11	434 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ALPK1	Q96QP1	1244 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CD180	Q99467	661 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	BTBD2	Q9BX70	525 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CHRNA10	Q9GZZ6	450 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	RBM38	Q9H0Z9	239 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	PIGU	Q9H490	435 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SMOC1	Q9H4F8	434 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CXorf21	Q9HAI6	301 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	LANCL2	Q9NS86	450 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SEMA5B	Q9P283	1151 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	NDRG4	Q9ULP0	352 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	FAM32A	Q9Y421	112 aa	Known RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	PCDHGA6	Q9Y5G7	932 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	SPACA6	W5XKT8	324 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	GPR179	Q6PRD1	2367 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	HEATR5A	Q86XA9	2040 aa		4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	MN1	Q10571	1320 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.55	□□□□□ -1.68
IDH3A-208	ENST00000558602	CPED1	A4D0V7	1026 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	DUXA	A6NLW8	204 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602		M0R129	80 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	PEX12	O00623	359 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	DUX1	O43812	170 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	CTNS	O60931	367 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	CPNE3	O75131	537 aa	Known RBP	4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	WBP4	O75554	376 aa	Known RBP	4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR2B3	O76000	313 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	IGKV1D-16	P01601	117 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	THY1	P04216	161 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	CFI	P05156	583 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	GNS	P15586	552 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	ALAS2	P22557	587 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	FMO3	P31513	532 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	RYK	P34925	604 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	EMD	P50402	254 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	ST13	P50502	369 aa	Known RBP	4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	IL5RA	Q01344	420 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	MAP4K2	Q12851	820 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	EPS8	Q12929	822 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	GPR68	Q15743	365 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	LPAL2	Q16609	132 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	NDUFA9	Q16795	377 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	RFX4	Q33E94	735 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	SMUG1	Q53HV7	270 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	TCTE1	Q5JU00	501 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	COLEC12	Q5KU26	742 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	GARNL3	Q5VVW2	1013 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	TMEM236	Q5W0B7	351 aa		4.54	□□□□□ -1.68
IDH3A-208	ENST00000558602	FIGNL1	Q6PIW4	674 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms