RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ITGA10O75578 1167 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 ERAL1O75616 437 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 AIFM1O95831 613 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 FEN1P39748 380 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 SESN3P58005 492 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 MRPS22P82650 360 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 DUSP2Q05923 314 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 GAB1Q13480 694 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 SNCBQ16143 134 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 GXYLT1Q4G148 440 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 ANXA8L1Q5VT79 327 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 ARHGAP11AQ6P4F7 1023 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 IKBIPQ70UQ0 350 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 SPATA24Q86W54 205 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 SRFBP1Q8NEF9 429 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 VPS37AQ8NEZ2 397 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 OR8J3Q8NGG0 315 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 OR5M9Q8NGP3 310 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 STMN2Q93045 179 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 GAL3ST3Q96A11 431 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 KAT8Q9H7Z6 458 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 COPS7BQ9H9Q2 264 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 PRDM9Q9NQV7 894 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 DNAJB12Q9NXW2 375 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 BTNL2Q9UIR0 455 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 UTS2RQ9UKP6 389 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 SNX8Q9Y5X2 465 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 ARHGAP21Q5T5U3 1957 aa10.29□□□□□ -0.76
RABGGTA-204ENST00000558376 A0A0G2JMM0 328 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 A0A1W2PPB8 328 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 A0A1W2PRS3 328 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 FAM166BA8MTA8 275 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 KIR3DP1A8MWS1 328 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 BAG2O95816 211 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 NUDT7P0C024 238 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 HSD17B1P14061 328 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 PCSK2P16519 638 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 KLK2P20151 261 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 ATP6V1B2P21281 511 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 PPP2R1BP30154 601 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 TRPC1P48995 793 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 GZMMP51124 257 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 GPR143P51810 404 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 MANFP55145 182 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 LIM2P55344 173 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 EEFSECP57772 596 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 PPIAP62937 165 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 DHFR2Q86XF0 187 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 CCDC116Q8IYX3 515 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 ZCCHC7Q8N3Z6 543 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 TMEM156Q8N614 296 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 DOK4Q8TEW6 326 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 MTERF3Q96E29 417 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 CSF3RQ99062 836 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 CPPED1Q9BRF8 314 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 LIN28AQ9H9Z2 209 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 TPT1P8Q9HAU6 139 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 RNPEPL1Q9HAU8 725 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 S100A14Q9HCY8 104 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 ATAD3AQ9NVI7 634 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 GPATCH2Q9NW75 528 aa10.28□□□□□ -0.76
RABGGTA-204ENST00000558376 C1orf226A1L170 272 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 TMEM200CA6NKL6 621 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 VGLL3A8MV65 326 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 TGFBR3LH3BV60 316 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 ARPC2O15144 300 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 CTAG2O75638 210 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 GLI4P10075 376 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 RNH1P13489 461 aaKnown RBP10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 CLCN2P51788 898 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 TRA2BP62995 288 aaKnown RBP10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 ID2Q02363 134 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 FOLH1Q04609 750 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 TGM3Q08188 693 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 HSPB3Q12988 150 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 SNTB1Q13884 538 aaKnown RBP10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 COX20Q5RI15 118 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 GLYATQ6IB77 296 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 RTL6Q6ICC9 239 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 ANGPTL8Q6UXH0 198 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 MSANTD1Q6ZTZ1 278 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 ABHD13Q7L211 337 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 CA13Q8N1Q1 262 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 B3GNT7Q8NFL0 401 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 OR5M3Q8NGP4 307 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 CXorf36Q9H7Y0 433 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 DCLRE1BQ9H816 532 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 ANKRA2Q9H9E1 313 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 TIMMDC1Q9NPL8 285 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 CES1P1Q9UKY3 287 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 PCDHGB4Q9UN71 923 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 CLDN16Q9Y5I7 305 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 FAM215AQ9Y5M1 114 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 LIPGQ9Y5X9 500 aa10.27□□□□□ -0.76
RABGGTA-204ENST00000558376 NINQ8N4C6 2090 aa10.27□□□□□ -0.77
RABGGTA-204ENST00000558376 A0A0G2JNJ9 132 aa10.27□□□□□ -0.77
RABGGTA-204ENST00000558376 H3BNX3 289 aa10.27□□□□□ -0.77
RABGGTA-204ENST00000558376 B3GALT2O43825 422 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms