RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SPACA6W5XKT8 324 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 TGFBR3LH3BV60 316 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 SYT5O00445 386 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 CDC42EP2O14613 210 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 DSCR3O14972 297 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 UBXN7O94888 489 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 ALOX5P09917 674 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 HTR2AP28223 471 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 OMPP47874 163 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 GFERP55789 205 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 ZNF846Q147U1 533 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 ARHGAP11BQ3KRB8 267 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 NKAIN2Q5VXU1 208 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 WDR88Q6ZMY6 472 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 SYT13Q7L8C5 426 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 ZNF367Q7RTV3 350 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 ZNF655Q8N720 491 aaPredicted RBP9.83□□□□□ -0.84
TPM1-210ENST00000558264 C19orf47Q8N9M1 422 aaKnown RBP9.83□□□□□ -0.84
TPM1-210ENST00000558264 OR52R1Q8NGF1 315 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 OR6Q1Q8NGQ2 317 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 PFN4Q8NHR9 129 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 TMEM80Q96HE8 168 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 TWSG1Q9GZX9 223 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 MTHFD2LQ9H903 347 aaPredicted RBP9.83□□□□□ -0.84
TPM1-210ENST00000558264 ANKHQ9HCJ1 492 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 LYRM4Q9HD34 91 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 CNOT2Q9NZN8 540 aaKnown RBP9.83□□□□□ -0.84
TPM1-210ENST00000558264 PTGFRNQ9P2B2 879 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 POMT2Q9UKY4 750 aa9.83□□□□□ -0.84
TPM1-210ENST00000558264 AGAP5A6NIR3 686 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 HYAL3O43820 417 aaPredicted RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 KIAA0513O60268 411 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 HBQ1P09105 142 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SRFP11831 508 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SSTR4P31391 388 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ETV5P41161 510 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ETV1P50549 477 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ZNF136P52737 540 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SMSP52788 366 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 BTG2P78543 158 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 CDK5Q00535 292 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 TEKQ02763 1124 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 DUSP8Q13202 625 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 LARS2Q15031 903 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 OR2G6Q5TZ20 316 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 PRAMEF8Q5VWM4 474 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 PRAMEF7Q5VXH5 474 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SLC27A4Q6P1M0 643 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 HSDL2Q6YN16 418 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 MCATQ8IVS2 390 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 CYP4Z2PQ8N1L4 340 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 MFSD4AQ8N468 514 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 OR52I1Q8NGK6 324 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 OR4Q3Q8NH05 313 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 PIGXQ8TBF5 258 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 GRHL3Q8TE85 626 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 TMEM203Q969S6 136 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 TRMT61AQ96FX7 289 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 ABHD8Q96I13 439 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 TGM7Q96PF1 710 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SEMA6CQ9H3T2 930 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 PIGUQ9H490 435 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 CACYBPQ9HB71 228 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 HMG20AQ9NP66 347 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ATP13A2Q9NQ11 1180 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ERGIC3Q9Y282 383 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 DTX4Q9Y2E6 619 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 COL6A3P12111 3177 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 VPS13AQ96RL7 3174 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SMIM30A4D0T7 59 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 FAM183AA6NL82 134 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 GPX5O75715 221 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ATP1B1P05026 303 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 MYF5P13349 255 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 CD79BP40259 229 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 TGM4P49221 684 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 EEF1A1P68104 462 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 MGAT2Q10469 447 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 COX10Q12887 443 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 TDGQ13569 410 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 KCNAB1Q14722 419 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 COL19A1Q14993 1142 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SPHARQ15513 63 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 LIPKQ5VXJ0 399 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 Q6ZNX1 250 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 DCDC5Q6ZRR9 648 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ATCAYQ86WG3 371 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 SAMD14Q8IZD0 417 aaPredicted RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 ARL14Q8N4G2 192 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 BBS1Q8NFJ9 593 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 GNPDA2Q8TDQ7 276 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 ZFPM2Q8WW38 1151 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 CRELD1Q96HD1 420 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 BCL7BQ9BQE9 202 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 CNPPD1Q9BV87 410 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 PHF7Q9BWX1 381 aaPredicted RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 POLDIP3Q9BY77 421 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 DPH1Q9BZG8 443 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 HHATLQ9HCP6 504 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms