RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 GZMKP49863 264 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 RAB28P51157 221 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 TMBIM6P55061 237 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 CLRN1P58418 232 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 SELENOWP63302 87 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 C2orf80Q0P641 193 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 CNTN1Q12860 1018 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 DDX39BQ13838 428 aaKnown RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 INAQ16352 499 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 HKDC1Q2TB90 917 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 LRRC73Q5JTD7 316 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 OTUD3Q5T2D3 398 aaPredicted RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 GCNT6Q5T4J0 391 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 PIP5KL1Q5T9C9 394 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 FAM71E1Q6IPT2 247 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 ANKRD54Q6NXT1 300 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 VITQ6UXI7 678 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 WASH2PQ6VEQ5 465 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 USP30Q70CQ3 517 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 COMMD6Q7Z4G1 85 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 RBM23Q86U06 439 aaKnown RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 ZNF547Q8IVP9 402 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 LINC00471Q8N535 108 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 CAMKVQ8NCB2 501 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 OR7A2PQ8NGA2 310 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 OR4K1Q8NGD4 311 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 OR4A15Q8NGL6 344 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 CLHC1Q8NHS4 586 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 C16orf78Q8WTQ4 265 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 TMEM171Q8WVE6 324 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 NR4A3Q92570 626 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 CORO2AQ92828 525 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 MOAP1Q96BY2 351 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 RSPRY1Q96DX4 576 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 ZBED6CLQ96FA7 236 aaPredicted RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 MSANTD3Q96H12 275 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 NECTIN4Q96NY8 510 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 INPP5KQ9BT40 448 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 NLNQ9BYT8 704 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 ROGDIQ9GZN7 287 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 RBM38Q9H0Z9 239 aaKnown RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 ZNF552Q9H707 407 aaPredicted RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 TRPV5Q9NQA5 729 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 MIEF1Q9NQG6 463 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 ACSS1Q9NUB1 689 aaPredicted RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 TMEM184CQ9NVA4 438 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 FAM118AQ9NWS6 357 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 NCDNQ9UBB6 729 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 PEMTQ9UBM1 199 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 FAM32AQ9Y421 112 aaKnown RBP6.75□□□□□ -1.33
MARK3-212ENST00000558223 PCDHGB1Q9Y5G3 927 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 CEPT1Q9Y6K0 416 aa6.75□□□□□ -1.33
MARK3-212ENST00000558223 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 LOC100130705A0A1B0GUX0 176 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ARRDC5A6NEK1 342 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 TMEM202A6NGA9 273 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 NKX2-8O15522 239 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 HS6ST1O60243 411 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 MPZL2O60487 215 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 CBFA2T3O75081 653 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SOX30O94993 753 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 LRATO95237 230 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SNAP29O95721 258 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 CPNE6O95741 557 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ZNF682O95780 498 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SEMG1P04279 462 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 LAMP1P11279 417 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SFTPCP11686 197 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 PEPDP12955 493 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 HLA-EP13747 358 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 FCARP24071 287 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 EEF1B2P24534 225 aaKnown RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 IGFBP5P24593 272 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 UQCRC1P31930 480 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 AHRP35869 848 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 NUDT1P36639 197 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 LBX1P52954 281 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 MAPK12P53778 367 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ITGA1P56199 1179 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 GMFBP60983 142 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 RAE1P78406 368 aaKnown RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 MRPS21P82921 87 aaKnown RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 REEP5Q00765 189 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 PRDX1Q06830 199 aaKnown RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 PIGFQ07326 219 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 KRT33BQ14525 404 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 IL11RAQ14626 422 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 FBXO43Q4G163 708 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 IFI44LQ53G44 452 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 TCEAL5Q5H9L2 206 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 C6orf141Q5SZD1 244 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 KHDRBS2Q5VWX1 349 aaKnown RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 TSSK4Q6SA08 328 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SPESP1Q6UW49 350 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ENPP6Q6UWR7 440 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ADGRD2Q7Z7M1 963 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms