RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 AAGABQ6PD74 315 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 UNQ6494/PRO21346Q6UXR6 183 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 CBLL1Q75N03 491 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 EIF3MQ7L2H7 374 aaKnown RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 MISPQ8IVT2 679 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 BCORP1Q8N888 145 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 ANKFN1Q8N957 763 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 FBXO30Q8TB52 745 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 PROX1Q92786 737 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 MAL2Q969L2 176 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 SLC35B4Q969S0 331 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 UTP4Q969X6 686 aaKnown RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 SGCZQ96LD1 299 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 COL21A1Q96P44 957 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 PINK1Q9BXM7 581 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 PCDHAC1Q9H158 963 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 NXF5Q9H1B4 397 aaKnown RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 MAGIXQ9H6Y5 334 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 ABCG2Q9UNQ0 655 aa11.46□□□□□ -0.57
TPM1-209ENST00000558072 GPC6Q9Y625 555 aaPredicted RBP11.46□□□□□ -0.57
TPM1-209ENST00000558072 DSPPQ9NZW4 1301 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SYT5O00445 386 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 EFSO43281 561 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 PPM1BO75688 479 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SERPINA1P01009 418 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 C1QCP02747 245 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 FCGR1AP12314 374 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ITGA3P26006 1051 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ITPKBP27987 946 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ABCD3P28288 659 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ST13P50502 369 aaKnown RBP11.45□□□□□ -0.58
TPM1-209ENST00000558072 MS4A2Q01362 244 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 CDC20Q12834 499 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ABHD17BQ5VST6 288 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 NPSR1Q6W5P4 371 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 CCDC81Q6ZN84 652 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 FKBP9P1Q75LS8 142 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SPPL2CQ8IUH8 684 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ZNF440Q8IYI8 595 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 TMEM156Q8N614 296 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ZNF321PQ8N8H1 164 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 FAM156AQ8NDB6 213 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SIMC1Q8NDZ2 872 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ASB15Q8WXK1 588 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 PIK3R3Q92569 461 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 NR4A3Q92570 626 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 OMA1Q96E52 524 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 PYURFQ96I23 114 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 THOC3Q96J01 351 aaKnown RBP11.45□□□□□ -0.58
TPM1-209ENST00000558072 DOHHQ9BU89 302 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SLC38A1Q9H2H9 487 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 RASSF4Q9H2L5 321 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SDHAF3Q9NRP4 125 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ANAPC2Q9UJX6 822 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 ZNF223Q9UK11 482 aaPredicted RBP11.45□□□□□ -0.58
TPM1-209ENST00000558072 PACSIN3Q9UKS6 424 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SLC35A3Q9Y2D2 325 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 SLC9A8Q9Y2E8 581 aa11.45□□□□□ -0.58
TPM1-209ENST00000558072 RRP15Q9Y3B9 282 aaKnown RBP11.45□□□□□ -0.58
TPM1-209ENST00000558072 A0A1W2PQD3 144 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 TCRBV3S1A0A5B6 114 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 DHRS12A0PJE2 317 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 AGAP5A6NIR3 686 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 A8MUI8 341 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 NKX2-8O15522 239 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 ITGA10O75578 1167 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 MFN2O95140 757 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 CHRM4P08173 479 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 PABPC4LP0CB38 370 aaKnown RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 UQCRBP14927 111 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 TBXA2RP21731 343 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 ADH7P40394 386 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 MLF1P58340 268 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 KCNC4Q03721 635 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 CHRNEQ04844 493 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 SNTA1Q13424 505 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 KPNB1Q14974 876 aaKnown RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 GPR68Q15743 365 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 ZNF141Q15928 474 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 CYBRD1Q53TN4 286 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 ZNF311Q5JNZ3 666 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 AGAP7PQ5VUJ5 663 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 TYW3Q6IPR3 259 aaKnown RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 TCTN3Q6NUS6 607 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 FIGNL1Q6PIW4 674 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 DHRS4L2Q6PKH6 230 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 CYP2R1Q6VVX0 501 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 FRRS1Q6ZNA5 592 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 APLFQ8IW19 511 aaPredicted RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 SPACA3Q8IXA5 215 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 C10orf111Q8N326 155 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 OR52P1PQ8NH57 321 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 GEMIN6Q8WXD5 167 aaKnown RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 ZCCHC14Q8WYQ9 949 aaKnown RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 TMBIM1Q969X1 311 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 DUS3LQ96G46 650 aaKnown RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 CRELD1Q96HD1 420 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 AGAP4Q96P64 663 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms