RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 C14orf105Q9NVL8 296 aa18.89■□□□□ 0.62
SNRPA1-205ENST00000558036 KCND3Q9UK17 655 aa18.89■□□□□ 0.62
SNRPA1-205ENST00000558036 CBLCQ9ULV8 474 aa18.89■□□□□ 0.62
SNRPA1-205ENST00000558036 A4GNTQ9UNA3 340 aa18.89■□□□□ 0.62
SNRPA1-205ENST00000558036 NTNG1Q9Y2I2 539 aa18.89■□□□□ 0.62
SNRPA1-205ENST00000558036 IFT52Q9Y366 437 aa18.89■□□□□ 0.62
SNRPA1-205ENST00000558036 NINQ8N4C6 2090 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 CUL9Q8IWT3 2517 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 TRBV4-1A0A0J9YWV2 114 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 CDC14CA4D256 554 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 VSTM2BA6NLU5 285 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 BCAS1O75363 584 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 AGXTP21549 392 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 IGFBP5P24593 272 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 TRHRP34981 398 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 PIGAP37287 484 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 LARS2Q15031 903 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 SLC36A3Q495N2 470 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 RAB11FIP2Q7L804 512 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 ANKRD37Q7Z713 158 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 OFCC1Q8IZS5 231 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 MARVELD2Q8N4S9 558 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 DHRSXQ8N5I4 330 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 ZNF614Q8N883 585 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 BCORP1Q8N888 145 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 OR9Q2Q8NGE9 314 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 MR1Q95460 341 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 MBOAT4Q96T53 435 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 NXF5Q9H1B4 397 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 CACYBPQ9HB71 228 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 AKAP7Q9P0M2 348 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 KIF17Q9P2E2 1029 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 ZNF232Q9UNY5 417 aa18.89■□□□□ 0.61
SNRPA1-205ENST00000558036 ONECUT2O95948 504 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 ALBP02768 609 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 RPS4Y1P22090 263 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 EMP2P54851 167 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 EEF1A1P68104 462 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 FGD3Q5JSP0 725 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 DHRS4L2Q6PKH6 230 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 C9orf40Q8IXQ3 194 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 GALNT6Q8NCL4 622 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 C8orf44Q96CB5 159 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 NRBF2Q96F24 287 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 SLC46A1Q96NT5 459 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 ARHGDIGQ99819 225 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 CRB3Q9BUF7 120 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 B4E171 279 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 SYT5O00445 386 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 ALOX12BO75342 701 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 CSO75390 466 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 SLC5A2P31639 672 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 TSPAN7P41732 249 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 LIMS1P48059 325 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 PDZK1Q5T2W1 519 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 MRPL2Q5T653 305 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 MRPL14Q6P1L8 145 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 SLC5A8Q8N695 610 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 GIPC3Q8TF64 312 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 EFHD2Q96C19 240 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 ALPK1Q96QP1 1244 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 FEVQ99581 238 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 ANKRD60Q9BZ19 345 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 STRADBQ9C0K7 418 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 PISDQ9UG56 409 aa18.88■□□□□ 0.61
SNRPA1-205ENST00000558036 ZFHX2Q9C0A1 2572 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 MUC6Q6W4X9 2439 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 ZNF292O60281 2723 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 DBIP07108 87 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 KLK3P07288 261 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 MICAQ29983 383 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 COLEC12Q5KU26 742 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 KDM4DQ6B0I6 523 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 UGT2A3Q6UWM9 527 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 TAGAPQ8N103 731 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 OR10G2Q8NGC3 310 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 OR1N1Q8NGS0 311 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 METTL21AQ8WXB1 218 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 GATA6Q92908 595 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 TRIM45Q9H8W5 580 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 LIN28AQ9H9Z2 209 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 KLHL28Q9NXS3 571 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 COPS7AQ9UBW8 275 aa18.87■□□□□ 0.61
SNRPA1-205ENST00000558036 C2orf92A0A1B0GVN3 265 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 CPSF4LA6NMK7 179 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 GKN3PP0CG01 181 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 CYP4B1P13584 511 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 PRG2P13727 222 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 NID1P14543 1247 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 CAPGP40121 348 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 RGS8P57771 180 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 ADARB1P78563 741 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 E2F1Q01094 437 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 KCNAB2Q13303 367 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 ILKQ13418 452 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 SEC23BQ15437 767 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 DCAF12Q5T6F0 453 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 FAHD1Q6P587 224 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 PRR22Q8IZ63 422 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 ACAD8Q9UKU7 415 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms