RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ATP6V1G3Q96LB4 118 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 PRRC1Q96M27 445 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 TECTBQ96PL2 329 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 TGS1Q96RS0 853 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 GAL3ST1Q99999 423 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 C19orf43Q9BQ61 176 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 TUBA1CQ9BQE3 449 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 TTYH2Q9BSA4 534 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 NXF5Q9H1B4 397 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 RGCCQ9H4X1 137 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 BICC1Q9H694 974 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 SUDS3Q9H7L9 328 aaPredicted RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 CYP3A43Q9HB55 503 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 NMUR1Q9HB89 426 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 SLC17A5Q9NRA2 495 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 INTS9Q9NV88 658 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 PDP1Q9P0J1 537 aaPredicted RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 PSMC3IPQ9P2W1 217 aaPredicted RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 GALPQ9UBC7 116 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 EIF3KQ9UBQ5 218 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 PACSIN2Q9UNF0 486 aaPredicted RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 MEMO1Q9Y316 297 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 EXOSC1Q9Y3B2 195 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 TIMM10BQ9Y5J6 103 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 ALG6Q9Y672 507 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 RPAP1Q9BWH6 1393 aaPredicted RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 GREB1LQ9C091 1923 aaPredicted RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 TRAV25A0A0B4J276 109 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 LRP5LA4QPB2 252 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 HHLA1C9JL84 531 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 NEDD8-MDP1E9PL57 170 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 HAS3O00219 553 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TRDMT1O14717 391 aaKnown RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 MSH4O15457 936 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 RANBP6O60518 1105 aaKnown RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 CIDEAO60543 219 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 H6PDO95479 791 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 NUDT3O95989 172 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 CST1P01037 141 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 CSTAP01040 98 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TSHBP01222 138 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 GPIP06744 558 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 ALOX5P09917 674 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 BCKDHAP12694 445 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 IMPDH1P20839 514 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 ANXA13P27216 316 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 OTX1P32242 354 aaPredicted RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 UGT1A5P35504 534 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SOX3P41225 446 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 CRYBB2P43320 205 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 P2RY1P47900 373 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 OTUD4Q01804 1114 aaKnown RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 RGS1Q08116 209 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SRSF4Q08170 494 aaKnown RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 TWIST1Q15672 202 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TAB1Q15750 504 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 UBE2V2Q15819 145 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SGSM1Q2NKQ1 1148 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SBK1Q52WX2 424 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 HIKESHIQ53FT3 197 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TECRLQ5HYJ1 363 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 OTUD3Q5T2D3 398 aaPredicted RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 LIPNQ5VXI9 398 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SLX4IPQ5VYV7 408 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 ACSM5Q6NUN0 579 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TMEM53Q6P2H8 277 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SLC25A47Q6Q0C1 308 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 CHMP1BQ7LBR1 199 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 VTCN1Q7Z7D3 282 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TBC1D10CQ8IV04 446 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 MICU2Q8IYU8 434 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 GTPBP8Q8N3Z3 284 aaPredicted RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 DHRSXQ8N5I4 330 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 CHDHQ8NE62 594 aaPredicted RBP3.29□□□□□ -1.88
TDP1-217ENST00000557782 OR4F17Q8NGA8 305 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 OR4F5Q8NH21 305 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 GLYATL2Q8WU03 294 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 GATAD1Q8WUU5 269 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 FCAMRQ8WWV6 532 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 ELMO1Q92556 727 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 DYRK2Q92630 601 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TM4SF19Q96DZ7 209 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 C2orf48Q96LS8 159 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 ZNF354BQ96LW1 612 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SLC38A2Q96QD8 506 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 OR4F4Q96R69 305 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 SLC6A7Q99884 636 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 DPH7Q9BTV6 452 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 TRIM62Q9BVG3 475 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 GPR174Q9BXC1 333 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 DUSP16Q9BY84 665 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 NARFLQ9H6Q4 476 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 AZI2Q9H6S1 392 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 MAN2C1Q9NTJ4 1040 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 POLDIP2Q9Y2S7 368 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 COX11Q9Y6N1 276 aa3.29□□□□□ -1.88
TDP1-217ENST00000557782 GRIN2DO15399 1336 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ZNF840PA6NDX5 716 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 FRG2CA6NGY1 282 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms