RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ZNF681Q96N22 645 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 SMR3AQ99954 134 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 BRINP2Q9C0B6 783 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 RAB17Q9H0T7 212 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 DPH5Q9H2P9 285 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 ELOVL6Q9H5J4 265 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 GALNT9Q9HCQ5 603 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 PCTPQ9UKL6 214 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 SNX6Q9UNH7 406 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 MAPRE3Q9UPY8 281 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 PLLPQ9Y342 182 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 WIF1Q9Y5W5 379 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 ZNF780BQ9Y6R6 833 aa7.83□□□□□ -1.16
VRK1-206ENST00000557222 RTTNQ86VV8 2226 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 LRRC14BA6NHZ5 514 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 DEFB108AA8MXU0 73 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 EMC8O43402 210 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 DSCAMO60469 2012 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 TSPAN2O60636 221 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 ERAL1O75616 437 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 REM1O75628 298 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 SIX3O95343 332 aaPredicted RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 OTCP00480 354 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 COL6A2P12110 1019 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 CNTFP26441 200 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 KRT20P35900 424 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 FEN1P39748 380 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 GSTM5P46439 218 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 GALNT1Q10472 559 aaPredicted RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 GANABQ14697 944 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 EXOSC7Q15024 291 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 TSNAXIP1Q2TAA8 658 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 GLYR1Q49A26 553 aaPredicted RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 TRMT12Q53H54 448 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 TECRLQ5HYJ1 363 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 GCNT2Q8N0V5 402 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 PTGR2Q8N8N7 351 aaPredicted RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 ADCY4Q8NFM4 1077 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 OR52B6Q8NGF0 335 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 FBXO25Q8TCJ0 367 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 TMBIM1Q969X1 311 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 KLHL29Q96CT2 875 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 SFXN2Q96NB2 322 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 WFIKKN1Q96NZ8 548 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 C1QTNF3Q9BXJ4 246 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 MRPL1Q9BYD6 325 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 STMN4Q9H169 189 aaPredicted RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 ZBTB26Q9HCK0 441 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 HHATLQ9HCP6 504 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 CPSF2Q9P2I0 782 aaKnown RBP7.82□□□□□ -1.16
VRK1-206ENST00000557222 DKKL1Q9UK85 242 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 NFU1Q9UMS0 254 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 ZNF175Q9Y473 711 aa7.82□□□□□ -1.16
VRK1-206ENST00000557222 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 SONP18583 2426 aaKnown RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 USF3Q68DE3 2245 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 SLC22A20A6NK97 555 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 C16orf97H3BN30 126 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 PLOD3O60568 738 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 SMIM24O75264 130 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 TGM6O95932 706 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 CGAP01215 116 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ALDOAP04075 364 aaKnown RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 CT45A8P0DMV1 189 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 CT45A9P0DMV2 189 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 PPP3CBP16298 524 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 GRK2P25098 689 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 DPP4P27487 766 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 PHBP35232 272 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 UGT2B10P36537 528 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ARL1P40616 181 aaPredicted RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 MAGEA12P43365 314 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 KIR2DL2P43627 348 aaPredicted RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 STARP49675 285 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 GAS1P54826 345 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 B3GALT5-AS1P59052 145 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 FAM27E3Q08E93 113 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 NNATQ16517 81 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ERCC6LQ2NKX8 1250 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 CT45A2Q5DJT8 189 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ZNF628Q5EBL2 1059 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ZDHHC24Q6UX98 284 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 Q71RC1 249 aaPredicted RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 P4HA3Q7Z4N8 544 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 YTHDF3Q7Z739 585 aaKnown RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 CCDC25Q86WR0 208 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 FADS6Q8N9I5 356 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 OR4F6Q8NGB9 312 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 SPATA3Q8NHX4 192 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 SELENOMQ8WWX9 145 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 PHF21BQ96EK2 531 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 CNRIP1Q96F85 164 aaPredicted RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 PGM2Q96G03 612 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 MARK4Q96L34 752 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 VSTM2LQ96N03 204 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ADOQ96SZ5 270 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 CCL19Q99731 98 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 MRPL57Q9BQC6 102 aaKnown RBP7.81□□□□□ -1.16
VRK1-206ENST00000557222 MED18Q9BUE0 208 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 FUT8Q9BYC5 575 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms