RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ATG13O75143 517 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 UBL3O95164 117 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 BCHEP06276 602 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 ICAM2P13598 275 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 CELP19835 753 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 F8A1P23610 371 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 DDX6P26196 483 aaKnown RBP eCLIP11.78□□□□□ -0.52
APEX1-216ENST00000557159 IMPA1P29218 277 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 SOAT1P35610 550 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 NUP62P37198 522 aaPredicted RBP11.78□□□□□ -0.52
APEX1-216ENST00000557159 FRKP42685 505 aaPredicted RBP11.78□□□□□ -0.52
APEX1-216ENST00000557159 SNRPD1P62314 119 aaKnown RBP11.78□□□□□ -0.52
APEX1-216ENST00000557159 PTSQ03393 145 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 DEF8Q6ZN54 512 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 GAREM2Q75VX8 874 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 TSPAN33Q86UF1 283 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 HORMAD2Q8N7B1 307 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
APEX1-216ENST00000557159 OR4D11Q8NGI4 311 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 HAVCR2Q8TDQ0 301 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 GNPDA2Q8TDQ7 276 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 ST8SIA4Q92187 359 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 SGTBQ96EQ0 304 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 ASIC4Q96FT7 647 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 AHCYL2Q96HN2 611 aaKnown RBP11.78□□□□□ -0.52
APEX1-216ENST00000557159 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 FNDC11Q9BVV2 318 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
APEX1-216ENST00000557159 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 SAP130Q9H0E3 1048 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 ANKRD19PQ9H560 264 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 MVB12BQ9H7P6 319 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 CD93Q9NPY3 652 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 SDHAF2Q9NX18 166 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 SLC9A8Q9Y2E8 581 aa11.78□□□□□ -0.52
APEX1-216ENST00000557159 NUP210Q8TEM1 1887 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 J3QRE1 110 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TSPAN4O14817 238 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 NPC1O15118 1278 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 HYAL3O43820 417 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 NCR1O76036 304 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CHRM5P08912 532 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 H2AFB2P0C5Z0 115 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 TYRP14679 529 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 PRKACAP17612 351 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 HTR1FP30939 366 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CAPZA2P47755 286 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 SLC6A11P48066 632 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 SPINT3P49223 89 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CDH11P55287 796 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TAS2R50P59544 299 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CNTN1Q12860 1018 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TSPAN31Q12999 210 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 B3GNTL1Q67FW5 361 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 RGS7BPQ6MZT1 257 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 BHLHB9Q6PI77 547 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 ZNF322Q6U7Q0 402 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 TEX19Q8NA77 164 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 FAM71CQ8NEG0 241 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 SLC9A6Q92581 669 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 YIPF5Q969M3 257 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 UBE2E3Q969T4 207 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CMTM3Q96MX0 182 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CAMK1GQ96NX5 476 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TMED9Q9BVK6 235 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 SPATA5L1Q9BVQ7 753 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CACNG6Q9BXT2 260 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TEX12Q9BXU0 123 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 MFRPQ9BY79 579 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TM6SF2Q9BZW4 377 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 TAAR2Q9P1P5 351 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 CFAP97Q9P2B7 532 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 NFKBIL1Q9UBC1 381 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 SEC14L3Q9UDX4 400 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 ENTPD4Q9Y227 616 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 KLF2Q9Y5W3 355 aaPredicted RBP11.77□□□□□ -0.52
APEX1-216ENST00000557159 NPFFR2Q9Y5X5 522 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.52
APEX1-216ENST00000557159 ATG2AQ2TAZ0 1938 aa11.77□□□□□ -0.53
APEX1-216ENST00000557159 TRAV6A0A075B6T7 132 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 A0A1B0GTQ1 180 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 RNF13O43567 381 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 CFDP00746 253 aaPredicted RBP11.76□□□□□ -0.53
APEX1-216ENST00000557159 SERPIND1P05546 499 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 EIF4EP06730 217 aaKnown RBP11.76□□□□□ -0.53
APEX1-216ENST00000557159 SOX18P35713 384 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 TPMTP51580 245 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
APEX1-216ENST00000557159 MC1RQ01726 317 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 FZD5Q13467 585 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 MADCAM1Q13477 382 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 MLC1Q15049 377 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 CCDC85BQ15834 202 aaPredicted RBP11.76□□□□□ -0.53
APEX1-216ENST00000557159 ST3GAL2Q16842 350 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 RPS26P11Q5JNZ5 115 aaPredicted RBP11.76□□□□□ -0.53
APEX1-216ENST00000557159 IDNKQ5T6J7 187 aa11.76□□□□□ -0.53
APEX1-216ENST00000557159 HIST2H2AA3Q6FI13 130 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms