RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 DEFB127Q9H1M4 99 aa8.82□□□□□ -1
SRP54-210ENST00000556380 UBQLN3Q9H347 655 aa8.82□□□□□ -1
SRP54-210ENST00000556380 PIGUQ9H490 435 aa8.82□□□□□ -1
SRP54-210ENST00000556380 ZNF385DQ9H6B1 395 aa8.82□□□□□ -1
SRP54-210ENST00000556380 Q9N2J8 555 aa8.82□□□□□ -1
SRP54-210ENST00000556380 SLC52A3Q9NQ40 469 aa8.82□□□□□ -1
SRP54-210ENST00000556380 EQTNQ9NQ60 294 aa8.82□□□□□ -1
SRP54-210ENST00000556380 DUSP22Q9NRW4 184 aa8.82□□□□□ -1
SRP54-210ENST00000556380 FBXO34Q9NWN3 711 aa8.82□□□□□ -1
SRP54-210ENST00000556380 FLRT3Q9NZU0 649 aa8.82□□□□□ -1
SRP54-210ENST00000556380 OR10H1Q9Y4A9 318 aa8.82□□□□□ -1
SRP54-210ENST00000556380 KCNE3Q9Y6H6 103 aa8.82□□□□□ -1
SRP54-210ENST00000556380 PCNX1Q96RV3 2341 aa8.82□□□□□ -1
SRP54-210ENST00000556380 DIDO1Q9BTC0 2240 aaKnown RBP8.81□□□□□ -1
SRP54-210ENST00000556380 LOC100996750A0A140TA64 210 aa8.81□□□□□ -1
SRP54-210ENST00000556380 FAM234BA2RU67 622 aa8.81□□□□□ -1
SRP54-210ENST00000556380 PRAMEF25A6NGN4 478 aa8.81□□□□□ -1
SRP54-210ENST00000556380 FAM166BA8MTA8 275 aa8.81□□□□□ -1
SRP54-210ENST00000556380 TFECO14948 347 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 CFLARO15519 480 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ZNHIT1O43257 154 aa8.81□□□□□ -1
SRP54-210ENST00000556380 SEMA7AO75326 666 aa8.81□□□□□ -1
SRP54-210ENST00000556380 KCNK2O95069 426 aa8.81□□□□□ -1
SRP54-210ENST00000556380 CPSF4O95639 269 aaKnown RBP8.81□□□□□ -1
SRP54-210ENST00000556380 IL6P05231 212 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ALOX5P09917 674 aa8.81□□□□□ -1
SRP54-210ENST00000556380 UQCRC2P22695 453 aa8.81□□□□□ -1
SRP54-210ENST00000556380 PTPN6P29350 595 aa8.81□□□□□ -1
SRP54-210ENST00000556380 CDKN2CP42773 168 aa8.81□□□□□ -1
SRP54-210ENST00000556380 MAGEA5P43359 124 aa8.81□□□□□ -1
SRP54-210ENST00000556380 PRIM2P49643 509 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ATP4BP51164 291 aa8.81□□□□□ -1
SRP54-210ENST00000556380 POLR2JP52435 117 aaKnown RBP8.81□□□□□ -1
SRP54-210ENST00000556380 KCNJ2P63252 427 aa8.81□□□□□ -1
SRP54-210ENST00000556380 IRX1P78414 480 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 HSF1Q00613 529 aa8.81□□□□□ -1
SRP54-210ENST00000556380 PLGLB1Q02325 96 aa8.81□□□□□ -1
SRP54-210ENST00000556380 TP53BP2Q13625 1128 aa8.81□□□□□ -1
SRP54-210ENST00000556380 SLC10A1Q14973 349 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ZNHIT3Q15649 155 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 DECR1Q16698 335 aa8.81□□□□□ -1
SRP54-210ENST00000556380 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.81□□□□□ -1
SRP54-210ENST00000556380 SPDYE7PQ495Y7 208 aa8.81□□□□□ -1
SRP54-210ENST00000556380 AP1ARQ63HQ0 302 aa8.81□□□□□ -1
SRP54-210ENST00000556380 SAXO2Q658L1 398 aa8.81□□□□□ -1
SRP54-210ENST00000556380 APOOLQ6UXV4 268 aa8.81□□□□□ -1
SRP54-210ENST00000556380 TRILQ7L0X0 811 aa8.81□□□□□ -1
SRP54-210ENST00000556380 FAM109AQ8N4B1 249 aa8.81□□□□□ -1
SRP54-210ENST00000556380 OR4A15Q8NGL6 344 aa8.81□□□□□ -1
SRP54-210ENST00000556380 OR5AK3PQ8NH89 298 aa8.81□□□□□ -1
SRP54-210ENST00000556380 FBXO30Q8TB52 745 aa8.81□□□□□ -1
SRP54-210ENST00000556380 MIPOL1Q8TD10 442 aa8.81□□□□□ -1
SRP54-210ENST00000556380 TMCO6Q96DC7 493 aa8.81□□□□□ -1
SRP54-210ENST00000556380 NEURL3Q96EH8 262 aa8.81□□□□□ -1
SRP54-210ENST00000556380 OTUB1Q96FW1 271 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 RMND5BQ96G75 393 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 GNRHR2Q96P88 292 aa8.81□□□□□ -1
SRP54-210ENST00000556380 OR52E6Q96RD3 313 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ZBTB18Q99592 522 aa8.81□□□□□ -1
SRP54-210ENST00000556380 SIKE1Q9BRV8 207 aa8.81□□□□□ -1
SRP54-210ENST00000556380 BTBD2Q9BX70 525 aa8.81□□□□□ -1
SRP54-210ENST00000556380 KRTAP4-6Q9BYQ5 205 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ZNF703Q9H7S9 590 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 METTL7AQ9H8H3 244 aa8.81□□□□□ -1
SRP54-210ENST00000556380 GALNT9Q9HCQ5 603 aa8.81□□□□□ -1
SRP54-210ENST00000556380 NPHS2Q9NP85 383 aa8.81□□□□□ -1
SRP54-210ENST00000556380 ACKR4Q9NPB9 350 aa8.81□□□□□ -1
SRP54-210ENST00000556380 SLC6A13Q9NSD5 602 aa8.81□□□□□ -1
SRP54-210ENST00000556380 TMEM45AQ9NWC5 275 aa8.81□□□□□ -1
SRP54-210ENST00000556380 QPCTLQ9NXS2 382 aa8.81□□□□□ -1
SRP54-210ENST00000556380 DCTN4Q9UJW0 460 aa8.81□□□□□ -1
SRP54-210ENST00000556380 BOKQ9UMX3 212 aaPredicted RBP8.81□□□□□ -1
SRP54-210ENST00000556380 PCDHGB4Q9UN71 923 aa8.81□□□□□ -1
SRP54-210ENST00000556380 OSGIN2Q9Y236 505 aa8.81□□□□□ -1
SRP54-210ENST00000556380 EXPH5Q8NEV8 1989 aa8.81□□□□□ -1
SRP54-210ENST00000556380 GTF3C1Q12789 2109 aa8.8□□□□□ -1
SRP54-210ENST00000556380 RNF103-CHMP3A0A140T963 221 aa8.8□□□□□ -1
SRP54-210ENST00000556380 WIPF3A6NGB9 483 aa8.8□□□□□ -1
SRP54-210ENST00000556380 CCDC154A6NI56 674 aa8.8□□□□□ -1
SRP54-210ENST00000556380 C17orf51A8MQB3 221 aa8.8□□□□□ -1
SRP54-210ENST00000556380 NPIPB9F8W1W9 429 aa8.8□□□□□ -1
SRP54-210ENST00000556380 DYNC1I1O14576 645 aa8.8□□□□□ -1
SRP54-210ENST00000556380 SLC19A2O60779 497 aa8.8□□□□□ -1
SRP54-210ENST00000556380 PDE9AO76083 593 aa8.8□□□□□ -1
SRP54-210ENST00000556380 SOX30O94993 753 aa8.8□□□□□ -1
SRP54-210ENST00000556380 KCNH1O95259 989 aa8.8□□□□□ -1
SRP54-210ENST00000556380 UTS2O95399 124 aa8.8□□□□□ -1
SRP54-210ENST00000556380 HPNP05981 417 aa8.8□□□□□ -1
SRP54-210ENST00000556380 THBS1P07996 1170 aa8.8□□□□□ -1
SRP54-210ENST00000556380 NGFRP08138 427 aa8.8□□□□□ -1
SRP54-210ENST00000556380 KRT16P08779 473 aa8.8□□□□□ -1
SRP54-210ENST00000556380 TBXA2RP21731 343 aa8.8□□□□□ -1
SRP54-210ENST00000556380 IL12BP29460 328 aa8.8□□□□□ -1
SRP54-210ENST00000556380 LCN1P31025 176 aa8.8□□□□□ -1
SRP54-210ENST00000556380 EVI2BP34910 448 aa8.8□□□□□ -1
SRP54-210ENST00000556380 KRT20P35900 424 aa8.8□□□□□ -1
SRP54-210ENST00000556380 RPS26P62854 115 aaKnown RBP8.8□□□□□ -1
SRP54-210ENST00000556380 POU6F2P78424 691 aaPredicted RBP8.8□□□□□ -1
SRP54-210ENST00000556380 LRRC74AQ0VAA2 488 aa8.8□□□□□ -1
SRP54-210ENST00000556380 GRAMD1BQ3KR37 738 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms