RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 LCP2Q13094 533 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TRAF3Q13114 568 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CUL3Q13618 768 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 EXT1Q16394 746 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 MAPKAPK3Q16644 382 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 MEP1AQ16819 746 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 GALNTL6Q49A17 601 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 VWA5B1Q5TIE3 1220 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ACSM2BQ68CK6 577 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 JMJD6Q6NYC1 403 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 FAM180BQ6P0A1 224 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 METTL2BQ6P1Q9 378 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM205Q6UW68 189 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 SH2D5Q6ZV89 423 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 EXOC3L1Q86VI1 746 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 RPS19BP1Q86WX3 136 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF595Q8IYB9 648 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 IQCKQ8N0W5 287 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 LNX2Q8N448 690 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 KIF2BQ8N4N8 673 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 MREGQ8N565 214 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM156Q8N614 296 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 C1orf52Q8N6N3 182 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 OR4K14Q8NGD5 310 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 WDR20Q8TBZ3 569 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 RDH11Q8TC12 318 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 M1APQ8TC57 530 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 LINC00476Q8WZB0 136 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TM9SF4Q92544 642 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TANKQ92844 425 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 L3HYPDHQ96EM0 354 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 MAGED4Q96JG8 741 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PKNOX2Q96KN3 472 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CSF3RQ99062 836 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 UTP23Q9BRU9 249 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 GATA5Q9BWX5 397 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 EBPLQ9BY08 206 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CLK4Q9HAZ1 481 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 LYRM4Q9HD34 91 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 KLHL1Q9NR64 748 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 LYARQ9NX58 379 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 MS4A12Q9NXJ0 267 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 NKIRAS1Q9NYS0 192 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 C5AR2Q9P296 337 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 COPG2Q9UBF2 871 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 VPS29Q9UBQ0 182 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 BCAP29Q9UHQ4 241 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 LGALS13Q9UHV8 139 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PSME2Q9UL46 239 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ERVK-11Q9UQG0 969 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 STK38LQ9Y2H1 464 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ATG4BQ9Y4P1 393 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 COPG1Q9Y678 874 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF780BQ9Y6R6 833 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CELSR3Q9NYQ7 3312 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 RP1L1Q8IWN7 2480 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PCNX1Q96RV3 2341 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ZZEF1O43149 2961 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CHD6Q8TD26 2715 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SLC28A1O00337 649 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 FCHO1O14526 889 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 UBFD1O14562 309 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PCDH17O14917 1159 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 AZIN1O14977 448 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 RGS14O43566 566 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PEX1O43933 1283 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 TMPRSS11DO60235 418 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PCDH7O60245 1069 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 FGF17O60258 216 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PRKNO60260 465 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PEX11AO75192 247 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SKAP2O75563 359 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 LYPLA1O75608 230 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 C1QL1O75973 258 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ZFAND5O76080 213 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 LRATO95237 230 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 GPR75O95800 540 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 WDPCPO95876 746 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 TBX6O95947 436 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BPGMP07738 259 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 NR2F6P10588 404 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 UROSP10746 265 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BGNP21810 368 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PTGER1P34995 402 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 HTR6P50406 440 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 EFNA3P52797 238 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SEC24CP53992 1094 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 FOXA1P55317 472 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 UCP3P55916 312 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SLC26A5P58743 744 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 DNAJB13P59910 316 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 MAGOHP61326 146 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 NAA20P61599 178 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 FOXI1Q12951 378 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 STX3Q13277 289 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SERTAD2Q14140 314 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 CASP8Q14790 479 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PCLAFQ15004 111 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms