RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TMEM41AQ96HV5 264 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 PELOQ9BRX2 385 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 SORBS1Q9BX66 1292 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ERVK-6Q9BXR3 956 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ZNF717Q9BY31 904 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 DDX31Q9H8H2 851 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ERVK-19Q9WJR5 959 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ARID1AO14497 2285 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 KIAA1549Q9HCM3 1950 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 C2orf92A0A1B0GVN3 265 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 CLCA1A8K7I4 914 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 CXorf49A8MYA2 514 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 SAP18O00422 153 aaKnown RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PLPP1O14494 284 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 TP53I11O14683 189 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PGRMC2O15173 223 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 TRAPPC6AO75865 159 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 SEC31AO94979 1220 aaKnown RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 HEXAP06865 529 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 NAGAP17050 411 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 S1PR1P21453 382 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 ENPP1P22413 925 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 BSGP35613 385 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 CASP3P42574 277 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 SLCO1A2P46721 670 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 NAGLUP54802 743 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 ARL4CP56559 192 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 DCAF7P61962 342 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 NKX6-1P78426 367 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 SLC25A3Q00325 362 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PLIN5Q00G26 463 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 TNFRSF17Q02223 184 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 FUT7Q11130 342 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 FASTKD3Q14CZ7 662 aaKnown RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 ZKSCAN8Q15776 578 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 EIPR1Q53HC9 387 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 TMEM81Q6P7N7 255 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PRSS57Q6UWY2 283 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 CLEC9AQ6UXN8 241 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 TMEM64Q6YI46 380 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 Q71RC1 249 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 LRRC70Q7Z2Q7 622 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PRIMA1Q86XR5 153 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 C17orf47Q8NEP4 570 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 HUS1BQ8NHY5 278 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 DOK4Q8TEW6 326 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 SMPDL3BQ92485 455 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 UCN3Q969E3 161 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 ABTB1Q969K4 478 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 HSPBAP1Q96EW2 488 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 JSRP1Q96MG2 331 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 KRT12Q99456 494 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 MNTQ99583 582 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 GPR22Q99680 433 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PIP5K1AQ99755 562 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 UGT2B28Q9BY64 529 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 CXorf21Q9HAI6 301 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 CD274Q9NZQ7 290 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 PHF11Q9UIL8 331 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 C15orf41Q9Y2V0 281 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 SLC6A5Q9Y345 797 aa8.12□□□□□ -1.11
GTF2A1-204ENST00000556268 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 A0A0A6YYD5 115 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 FAM171A2A8MVW0 826 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 A8MXE2 369 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 H0YIV9 168 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 K7EPI3 171 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 PHGDHO43175 533 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 TMPRSS11DO60235 418 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 CCNT2O60583 730 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 CDH16O75309 829 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 SH3BGRLO75368 114 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 PRKRAO75569 313 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 PIAS1O75925 651 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 LRATO95237 230 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 LY6G6DO95868 133 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 ACTL6AO96019 429 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 ABCB1P08183 1280 aaPredicted RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 MTHFD2P13995 350 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 HK1P19367 917 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 GDF1P27539 372 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 PTPN6P29350 595 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 SSR2P43308 183 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 RPL21P46778 160 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 AGFG1P52594 562 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 FBXW4P57775 412 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 EEF1A1P68104 462 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 FOXF2Q12947 444 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 PDIA2Q13087 525 aaKnown RBP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 CUL3Q13618 768 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 RPS6KA2Q15349 733 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 DCST1Q5T197 706 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 EEF1A1P5Q5VTE0 462 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 LIPJQ5W064 366 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 GRHL2Q6ISB3 625 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 CMIPQ8IY22 773 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 LRRC75A-AS1Q8N1F1 130 aa8.11□□□□□ -1.11
GTF2A1-204ENST00000556268 RNF175Q8N4F7 328 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms