RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZNF180Q9UJW8 692 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ABCG2Q9UNQ0 655 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TIMM22Q9Y584 194 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ABCA1O95477 2261 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SEC14L5O43304 696 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CNOT4O95628 575 aaKnown RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ESRRBO95718 433 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 JUNP05412 331 aaKnown RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FPR1P21462 350 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MAP3K8P41279 467 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PTH2RP49190 550 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SERPINB9P50453 376 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FOXA1P55317 472 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PSPHP78330 225 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 OCRLQ01968 901 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PON3Q15166 354 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ERCC6LQ2NKX8 1250 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CTU2Q2VPK5 515 aaKnown RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CYP27C1Q4G0S4 372 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 RAET1LQ5VY80 246 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FAM71E1Q6IPT2 247 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 STAC2Q6ZMT1 411 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 C20orf204Q6ZNR8 217 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GPRIN3Q6ZVF9 776 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FAM214BQ7L5A3 538 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FAM9CQ8IZT9 166 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 OR2L13Q8N349 312 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MEIOBQ8N635 442 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 DUSP19Q8WTR2 217 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 HOXB13Q92826 284 aaPredicted RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZNF701Q9NV72 531 aaPredicted RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FAM120CQ9NX05 1096 aaKnown RBP12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TAS2R9Q9NYW1 312 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 H3BML4 177 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ULK1O75385 1050 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SUPT7LO94864 414 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SOX30O94993 753 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 IL33O95760 270 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KRT6AP02538 564 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KRT6BP04259 564 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ANXA4P09525 319 aaPredicted RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 NID1P14543 1247 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 DDCP20711 480 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TBXA2RP21731 343 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PSMA4P25789 261 aaKnown RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CASQ1P31415 396 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KRT20P35900 424 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KRT6CP48668 564 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ACSM2AQ08AH3 577 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZNF155Q12901 538 aaPredicted RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 STX5Q13190 355 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GANABQ14697 944 aaKnown RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 HEPACAMQ14CZ8 416 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SPIN4Q56A73 249 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ACSM2BQ68CK6 577 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TMEM107Q6UX40 140 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 METTL6Q8TCB7 284 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CAVIN3Q969G5 261 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TMEM204Q9BSN7 226 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 LMF2Q9BU23 707 aaKnown RBP12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GSTO2Q9H4Y5 243 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TNFRSF12AQ9NP84 129 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PLSCR4Q9NRQ2 329 aa12.87□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GXYLT2A0PJZ3 443 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 LINC01387J3KSC0 135 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 IL11P20809 199 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 IMPDH1P20839 514 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MPIP34949 423 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 C8orf74Q6P047 294 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SH2D5Q6ZV89 423 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TAOK1Q7L7X3 1001 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZAR1Q86SH2 424 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 LILRB1Q8NHL6 650 aaPredicted RBP12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 L3HYPDHQ96EM0 354 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 AMDHD1Q96NU7 426 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CLEC4AQ9UMR7 237 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 OR10H1Q9Y4A9 318 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CCL27Q9Y4X3 112 aa12.86□□□□□ -0.35
CHMP4BP1-201ENST00000556017 UTS2O95399 124 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SNRPAP09012 282 aaKnown RBP12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms