RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 STX5Q13190 355 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 ACSF3Q4G176 576 aaPredicted RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 ZAR1Q86SH2 424 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 OR10Q1Q8NGQ4 319 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 OR14L1PQ8NHC6 308 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 ASB5Q8WWX0 329 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 ABTB1Q969K4 478 aaPredicted RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 PRPF18Q99633 342 aaKnown RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 BHLHE41Q9C0J9 482 aaPredicted RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 THAP1Q9NVV9 213 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 FAM120CQ9NX05 1096 aaKnown RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 PPP4R1LQ9P1A2 415 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 MRTO4Q9UKD2 239 aaKnown RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 ABCG2Q9UNQ0 655 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 APCP25054 2843 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 A0A0G2JNJ9 132 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 FAM90A27PA6NNH2 459 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 ANKRD28O15084 1053 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 HNRNPRO43390 633 aaKnown RBP18.63■□□□□ 0.57
VTI1B-205ENST00000555543 KCNK2O95069 426 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 SNRPB2P08579 225 aaKnown RBP18.63■□□□□ 0.57
VTI1B-205ENST00000555543 HOXD4P09016 255 aaPredicted RBP18.63■□□□□ 0.57
VTI1B-205ENST00000555543 PRF1P14222 555 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 LBPP18428 481 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 SRD5A2P31213 254 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 PSMD4P55036 377 aaKnown RBP18.63■□□□□ 0.57
VTI1B-205ENST00000555543 OCRLQ01968 901 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 LASP1Q14847 261 aaKnown RBP18.63■□□□□ 0.57
VTI1B-205ENST00000555543 PGS1Q32NB8 556 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 GRAMD1BQ3KR37 738 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 AGBL2Q5U5Z8 902 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 OR4F3Q6IEY1 312 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 FIGNL1Q6PIW4 674 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 APOOLQ6UXV4 268 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 MARCH3Q86UD3 253 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 FADS6Q8N9I5 356 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 JADE3Q92613 823 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 WDYHV1Q96HA8 205 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 UCK2Q9BZX2 261 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 FBXO34Q9NWN3 711 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 TAS2R10Q9NYW0 307 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 Q9UFV3 132 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 CAMK2AQ9UQM7 478 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 CACNA1DQ01668 2161 aa18.63■□□□□ 0.57
VTI1B-205ENST00000555543 KIAA1549Q9HCM3 1950 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 UQCRHLA0A096LP55 91 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 NKX2-6A6NCS4 301 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 TOXO94900 526 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 ALDOCP09972 364 aaKnown RBP18.62■□□□□ 0.57
VTI1B-205ENST00000555543 TCEA1P23193 301 aaKnown RBP18.62■□□□□ 0.57
VTI1B-205ENST00000555543 CCT3P49368 545 aaKnown RBP18.62■□□□□ 0.57
VTI1B-205ENST00000555543 GFRA1P56159 465 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 HBA1P69905 142 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 TP53BP2Q13625 1128 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 CCNJQ5T5M9 372 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 CLECL1Q8IZS7 167 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 NATD1Q8N6N6 113 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 OR2M3Q8NG83 312 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 OR4K17Q8NGC6 315 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 OR5AK3PQ8NH89 298 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 LILRB4Q8NHJ6 448 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 RAB3IL1Q8TBN0 382 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 FAM110BQ8TC76 370 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 DPY30Q9C005 99 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 DSN1Q9H410 356 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 MANSC1Q9H8J5 431 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 NEUROD4Q9HD90 331 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 GPATCH2Q9NW75 528 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 DKKL1Q9UK85 242 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 ARHGAP21Q5T5U3 1957 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 PKDREJQ9NTG1 2253 aa18.62■□□□□ 0.57
VTI1B-205ENST00000555543 NUP214P35658 2090 aaPredicted RBP18.61■□□□□ 0.57
VTI1B-205ENST00000555543 ZIC3O60481 467 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 ALOX5P09917 674 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 KITP10721 976 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 DPP4P27487 766 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 PTGER4P35408 488 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 PRIM2P49643 509 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 PHC1P78364 1004 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 TFF3Q07654 80 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 LSM12Q3MHD2 195 aaKnown RBP18.61■□□□□ 0.57
VTI1B-205ENST00000555543 SPDYE7PQ495Y7 208 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 TTMPQ5BVD1 217 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 ATG16L1Q676U5 607 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 OGFOD2Q6N063 350 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 ZCCHC12Q6PEW1 402 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 IFNEQ86WN2 208 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 LIX1LQ8IVB5 337 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 WDR75Q8IWA0 830 aaKnown RBP18.61■□□□□ 0.57
VTI1B-205ENST00000555543 PM20D2Q8IYS1 436 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 LRRC34Q8IZ02 419 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 COX18Q8N8Q8 333 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 OR56A1Q8NGH5 318 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 OR4C3Q8NH37 302 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 SFXN5Q8TD22 340 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 CDS1Q92903 461 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 WDR55Q9H6Y2 383 aaPredicted RBP18.61■□□□□ 0.57
VTI1B-205ENST00000555543 MED11Q9P086 117 aa18.61■□□□□ 0.57
VTI1B-205ENST00000555543 RPH3AQ9Y2J0 694 aaPredicted RBP18.61■□□□□ 0.57
VTI1B-205ENST00000555543 GOLGA8QA0A0J9YX86 632 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms