RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TCEAL4Q96EI5 215 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 MOCOSQ96EN8 888 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ATXN7L3BQ96GX2 97 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 AGAP3Q96P47 875 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 AGAP4Q96P64 663 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 GAL3ST4Q96RP7 486 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SSX3Q99909 188 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TRIM51Q9BSJ1 452 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FTHL17Q9BXU8 183 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF665Q9H7R5 613 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 S100A14Q9HCY8 104 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 UBE2TQ9NPD8 197 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PRMT8Q9NR22 394 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZCCHC3Q9NUD5 404 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PLEK2Q9NYT0 353 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TEKT2Q9UIF3 430 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 EXOC7Q9UPT5 735 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FOXA2Q9Y261 457 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 MRPS18CQ9Y3D5 142 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ABCA2Q9BZC7 2435 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 KIAA1549LQ6ZVL6 1849 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 IGKV6D-41A0A0C4DH26 115 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 IGHV3-20A0A0C4DH32 117 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NDUFAF8A1L188 74 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 TRABD2BA6NFA1 517 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 SRRM4A7MD48 611 aaKnown RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 A8MU76 341 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ANHXE9PGG2 379 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 G3V2L1 256 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CCSO14618 274 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ADAM12O43184 909 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 B4GAT1O43505 415 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 IDH3BO43837 385 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CRLF1O75462 422 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 GMNNO75496 209 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CPNE6O95741 557 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CALCAP01258 141 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CHRNGP07510 517 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 LYNP07948 512 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NUDT17P0C025 328 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 HSPD1P10809 573 aaKnown RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 KRT5P13647 590 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CYP3A5P20815 502 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CCND2P30279 289 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 PKLRP30613 574 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 STIP1P31948 543 aaKnown RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 OR1D2P34982 312 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ATP6V1E1P36543 226 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CCR2P41597 374 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 TNFSF10P50591 281 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NDST2P52849 883 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 KCNK10P57789 538 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 IL9RQ01113 521 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 MFGE8Q08431 387 aaPredicted RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NFATC2Q13469 925 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 GK2Q14410 553 aaPredicted RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 HFEQ30201 348 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF528Q3MIS6 628 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 RFTN2Q52LD8 501 aaPredicted RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 C2CD6Q53TS8 623 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 PPM1LQ5SGD2 360 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF613Q6PF04 617 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 METTL7BQ6UX53 244 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 VITQ6UXI7 678 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 B3GLCTQ6Y288 498 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 GDPGP1Q6ZNW5 385 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF410Q86VK4 478 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ZFAND4Q86XD8 727 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ECHDC2Q86YB7 292 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 HDDC3Q8N4P3 179 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 SIDT2Q8NBJ9 832 aaKnown RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 AQP11Q8NBQ7 271 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 CCDC197Q8NCU1 140 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 MAPK1IP1LQ8NDC0 245 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 C8orf46Q8TAG6 207 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 MGARPQ8TDB4 240 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 SETD7Q8WTS6 366 aaKnown RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 UBTD2Q8WUN7 234 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 EEF2KMTQ96G04 330 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF599Q96NL3 588 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ERGIC2Q96RQ1 377 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 IWS1Q96ST2 819 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ATP6V0BQ99437 205 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 LGMNQ99538 433 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 FAM213AQ9BRX8 229 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NTMT1Q9BV86 223 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 TMEM117Q9H0C3 514 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NT5C3AQ9H0P0 336 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 AZI2Q9H6S1 392 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 MARCH7Q9H992 704 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 KCNK13Q9HB14 408 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 GPN1Q9HCN4 374 aaPredicted RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 MED17Q9NVC6 651 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 NUDT4Q9NZJ9 180 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 AKAP7Q9P0M2 348 aaPredicted RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 SH3GLB1Q9Y371 365 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 OR1A2Q9Y585 309 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 DNHD1Q96M86 4753 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 ZBED9Q6R2W3 1325 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 RTTNQ86VV8 2226 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms