RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UFL1O94874 794 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 JCHAINP01591 159 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 IGHDP01880 384 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 HOXD4P09016 255 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 PRG2P13727 222 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 PVRP15151 417 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 CALRP27797 417 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 CA8P35219 290 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 STK19P49842 368 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 HMGCS2P54868 508 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 PLOD1Q02809 727 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 SLC22A6Q4U2R8 563 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 RABGAP1LQ5R372 815 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 LRRC8BQ6P9F7 803 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 DPY19L4Q7Z388 723 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 KIAA1328Q86T90 577 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 VPS36Q86VN1 386 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 P2RY8Q86VZ1 359 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 HIPK1Q86Z02 1210 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 LRRC49Q8IUZ0 686 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 UNC5CLQ8IV45 518 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 ZDHHC21Q8IVQ6 265 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 NAXDQ8IW45 347 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 CNPY4Q8N129 248 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 SLC22A18ASQ8N1D0 253 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 GMCL1P1Q8NEA9 526 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 CNIH3Q8TBE1 160 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 PNPT1Q8TCS8 783 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 RASL10AQ92737 203 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 RPL3LQ92901 407 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 FOXN4Q96NZ1 517 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 MCCC1Q96RQ3 725 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 C19orf43Q9BQ61 176 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 NFKBIZQ9BYH8 718 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 PNNQ9H307 717 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 BARX2Q9UMQ3 279 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 DUSP12Q9UNI6 340 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 DHRS7Q9Y394 339 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 EXOSC1Q9Y3B2 195 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 MRPL11Q9Y3B7 192 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 CCDC7Q96M83 1385 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 STX7O15400 261 aaKnown RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 OR1F1O43749 312 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 SRSF10O75494 262 aaKnown RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 ANP32DO95626 131 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 CHRNA1P02708 482 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 UMPSP11172 480 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 RPA2P15927 270 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 UQCRC2P22695 453 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 PTBP1P26599 531 aaKnown RBP eCLIP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 RPL4P36578 427 aaKnown RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 BDKRB1P46663 353 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 NOVP48745 357 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 OSTNP61366 133 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 ZFP36L1Q07352 338 aaKnown RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 PJVKQ0ZLH3 352 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 IL18R1Q13478 541 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 PPP1R3AQ16821 1122 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 DCAF4L1Q3SXM0 396 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 SLC36A3Q495N2 470 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 VWA2Q5GFL6 755 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 FAM182AQ5T1J6 154 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF57Q68EA5 555 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 PARGQ86W56 976 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 TBC1D21Q8IYX1 336 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 SPAG16Q8N0X2 631 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 ARL14Q8N4G2 192 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 POM121L12Q8N7R1 296 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 CSNK1G2-AS1Q8NCQ2 148 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 FLVCR1-AS1Q8TAF5 88 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 CASD1Q96PB1 797 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 CCT8L2Q96SF2 557 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 TRIM9Q9C026 710 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 COMMD4Q9H0A8 199 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 POLR3FQ9H1D9 316 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 RMND5AQ9H871 391 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 TIGARQ9NQ88 270 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 SLC7A10Q9NS82 523 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 FARSBQ9NSD9 589 aaKnown RBP2.43□□□□□ -2.02
SCFD1-213ENST00000554776 SLC2A6Q9UGQ3 507 aa2.43□□□□□ -2.02
SCFD1-213ENST00000554776 IGHV3OR16-12A0A075B7B8 117 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 ESYT2A0FGR8 921 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 EFCAB7A8K855 629 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 A8MUI8 341 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 E9PAM4 449 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 FCN1O00602 326 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 ANGPT2O15123 496 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 GMFGO60234 142 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 SRPX2O60687 465 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 STX11O75558 287 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 IDH1O75874 414 aaKnown RBP2.42□□□□□ -2.02
SCFD1-213ENST00000554776 PIGRP01833 764 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 UGT2B4P06133 528 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 FOLR2P14207 255 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 SDC1P18827 310 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 ACVR1BP36896 505 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 HNMTP50135 292 aa2.42□□□□□ -2.02
SCFD1-213ENST00000554776 ARHGDIBP52566 201 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms