RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LRRTM2O43300 516 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TRIAP1O43715 76 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 RAD1O60671 282 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 UGT2B11O75310 529 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MOSPD3O75425 235 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ERAL1O75616 437 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 GYPCP04921 128 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CHRNGP07510 517 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 APRTP07741 180 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM191BP0C7N4 346 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SP9P0CG40 484 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CYP2D6P10635 497 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PSMC3P17980 439 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ERCC2P18074 760 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ABCB4P21439 1286 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PAICSP22234 425 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FPR3P25089 353 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ATP5A1P25705 553 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 LCN1P31025 176 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FOXN2P32314 431 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 THBS4P35443 961 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 AHRP35869 848 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SLC1A2P43004 574 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SERPINB10P48595 397 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CCR4P51679 360 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF41P51814 821 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 NR0B1P51843 470 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PRKAG1P54619 331 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 DEFA1P59665 94 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 DEFA3P59666 94 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ARF3P61204 181 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 RBX1P62877 108 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MRPS22P82650 360 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ARF1P84077 181 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PMP22Q01453 160 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 GNA12Q03113 381 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MBTD1Q05BQ5 628 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SLAQ13239 276 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TDGQ13569 410 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 GTF2H3Q13889 308 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 VEZF1Q14119 521 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MESDQ14696 234 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 GANABQ14697 944 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ACOX1Q15067 660 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FAM189A2Q15884 450 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 DECR1Q16698 335 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 HNRNPA1L2Q32P51 320 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 DUSP28Q4G0W2 176 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 Q5BKY6 102 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 COQ5Q5HYK3 327 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SLC35D3Q5M8T2 416 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PIP5KL1Q5T9C9 394 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ZDHHC20Q5W0Z9 365 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 WSCD1Q658N2 575 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 C11orf63Q6NUN7 778 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PMF1Q6P1K2 205 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TMIGD1Q6UXZ0 262 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 NAPRTQ6XQN6 538 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 DENND5BQ6ZUT9 1274 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CHST15Q7LFX5 561 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ISCA2Q86U28 154 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 VASH2Q86V25 355 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 COMMD7Q86VX2 200 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TGIF2LXQ8IUE1 241 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PARP8Q8N3A8 854 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 RASGEF1CQ8N431 466 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 GUF1Q8N442 669 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 C12orf45Q8N5I9 185 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CHDHQ8NE62 594 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ABHD11Q8NFV4 315 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 DMBX1Q8NFW5 382 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 VN1R2Q8NFZ6 395 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 OR6J1Q8NGC5 347 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 OR5D18Q8NGL1 313 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 OR9A2Q8NGT5 310 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SPATA22Q8NHS9 363 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FIBINQ8TAL6 211 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 BPIFB1Q8TDL5 484 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ADAMTS15Q8TE58 950 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 RAB2BQ8WUD1 216 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SCAMP4Q969E2 229 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TOP1MTQ969P6 601 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 KIAA1143Q96AT1 154 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 L3HYPDHQ96EM0 354 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 RRNAD1Q96FB5 475 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 HBEGFQ99075 208 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 LGMNQ99538 433 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TEAD3Q99594 435 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FAM118BQ9BPY3 351 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MXRA8Q9BRK3 442 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PCGF1Q9BSM1 259 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 NAT9Q9BTE0 207 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CNPPD1Q9BV87 410 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TSSK1BQ9BXA7 367 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 YTHDF1Q9BYJ9 559 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 SEMA4CQ9C0C4 833 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TCF7L1Q9HCS4 588 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 GKN1Q9NS71 199 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CENPMQ9NSP4 180 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TREX1Q9NSU2 369 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms