RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 NAGLUP54802 743 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ACTR3P61158 418 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 TNFRSF17Q02223 184 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 KDSRQ06136 332 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC34A1Q06495 639 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ELAVL2Q12926 359 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 TRMT5Q32P41 509 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 NADK2Q4G0N4 442 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 MS4A13Q5J8X5 152 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 SDHAF4Q5VUM1 108 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 METTL21CQ5VZV1 264 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 PMS2CLQ68D20 193 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ARSKQ6UWY0 536 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 MACC1Q6ZN28 852 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 LRRC74BQ6ZQY2 392 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 MTSS1LQ765P7 747 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 LRRC70Q7Z2Q7 622 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 PIM3Q86V86 326 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 KIRREL3Q8IZU9 778 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ARHGAP24Q8N264 748 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 UMODL1-AS1Q8N2C9 162 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 CPSF7Q8N684 471 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 TEX26Q8N6G2 289 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 TEX45Q8NA69 505 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 BHLHE23Q8NDY6 225 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 HUS1BQ8NHY5 278 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ITFG1Q8TB96 612 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC22A8Q8TCC7 542 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 PPP4R1Q8TF05 950 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 PTPMT1Q8WUK0 201 aaPredicted RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 KCTD4Q8WVF5 259 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 OTULINQ96BN8 352 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 EFHD2Q96C19 240 aaPredicted RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 FBXL8Q96CD0 374 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 NXNL1Q96CM4 212 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 IMP4Q96G21 291 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 OR52B2Q96RD2 323 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 RANBP9Q96S59 729 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 KXD1Q9BQD3 176 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 INPP5KQ9BT40 448 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 THTPAQ9BU02 230 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 GPR61Q9BZJ8 451 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 FAM192AQ9GZU8 254 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 BATF3Q9NR55 127 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ASAH2Q9NR71 780 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 CYSLTR2Q9NS75 346 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 FAM212BQ9NTI7 297 aaPredicted RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 RBM22Q9NW64 420 aaKnown RBP eCLIP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 TXNDC16Q9P2K2 825 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 CRNNQ9UBG3 495 aaPredicted RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 ZDHHC2Q9UIJ5 367 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 RUVBL2Q9Y230 463 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 PLEKHA6Q9Y2H5 1048 aa4.84□□□□□ -1.63
MTHFD1-206ENST00000554353 CHD8Q9HCK8 2581 aa4.84□□□□□ -1.64
MTHFD1-206ENST00000554353 NCOR2Q9Y618 2525 aa4.84□□□□□ -1.64
MTHFD1-206ENST00000554353 GPR179Q6PRD1 2367 aa4.84□□□□□ -1.64
MTHFD1-206ENST00000554353 SDK1Q7Z5N4 2213 aa4.84□□□□□ -1.64
MTHFD1-206ENST00000554353 EPG5Q9HCE0 2579 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 TPRP12270 2363 aaKnown RBP4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 FREM2Q5SZK8 3169 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 SPAG17Q6Q759 2223 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 DMXL2Q8TDJ6 3036 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 KANSL1LA0AUZ9 987 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 GOLGA8OA6NCC3 632 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 GOLGA8NF8WBI6 632 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 MS4A18H0YCH9 400 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 J3KR12 359 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 HDAC3O15379 428 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 YKT6O15498 198 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 HCRTR2O43614 444 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 LDB2O43679 373 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 BUD23O43709 281 aaKnown RBP4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 KLK8O60259 260 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 ZMPSTE24O75844 475 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 SORBS2O94875 1100 aaKnown RBP4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 OR6B1O95007 311 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 PAPSS2O95340 614 aaPredicted RBP4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 PIGNO95427 931 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 CH25HO95992 272 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 BCL10O95999 233 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 OTCP00480 354 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 IGLV3-27P01718 113 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 FGF2P09038 288 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 HAPLN1P10915 354 aaPredicted RBP4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 COX4I1P13073 169 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 HPGDP15428 266 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 ARSBP15848 533 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 VCLP18206 1134 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 ADRA2CP18825 462 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 TNFRSF1BP20333 461 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 ACHEP22303 614 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 CDC25CP30307 473 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 CAPGP40121 348 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 SLC1A2P43004 574 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 MAGEA11P43364 429 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 RPL14P50914 215 aaKnown RBP4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 NDST2P52849 883 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 MTTPP55157 894 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 TAS2R39P59534 338 aa4.83□□□□□ -1.64
MTHFD1-206ENST00000554353 DNAJB13P59910 316 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms