RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 BZW1Q7L1Q6 419 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 TRPM8Q7Z2W7 1104 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LUZP2Q86TE4 346 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ISCA2Q86U28 154 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 BIVMQ86UB2 503 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 VPS36Q86VN1 386 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PARGQ86W56 976 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 TGIF2LXQ8IUE1 241 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 C11orf53Q8IXP5 236 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 KATNAL2Q8IYT4 538 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 TCAIMQ8N3R3 496 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 TRIML2Q8N7C3 387 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ZNF383Q8NA42 475 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SLC37A3Q8NCC5 494 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 C17orf47Q8NEP4 570 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 BBS1Q8NFJ9 593 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 OR1L4Q8NGR5 311 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 OR52N5Q8NH56 324 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RDH11Q8TC12 318 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LRRC15Q8TF66 581 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PIBF1Q8WXW3 757 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 MRPL24Q96A35 216 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 TMEM143Q96AN5 459 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 EFHD2Q96C19 240 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 ELMO2Q96JJ3 720 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ATP6V1G3Q96LB4 118 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 C12orf66Q96MD2 445 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ANKRD27Q96NW4 1050 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 AGAP4Q96P64 663 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ACCSQ96QU6 501 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 NPY6RQ99463 290 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RIT2Q99578 217 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CDCA3Q99618 268 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 CHP1Q99653 195 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CENPKQ9BS16 269 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 NUSAP1Q9BXS6 441 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 OR2B2Q9GZK3 357 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LAT2Q9GZY6 243 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 NXF5Q9H1B4 397 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 CXXC4Q9H2H0 198 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 VIPAS39Q9H9C1 493 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ANKRA2Q9H9E1 313 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CYP3A43Q9HB55 503 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SLC25A19Q9HC21 320 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ZNF160Q9HCG1 818 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 POLD4Q9HCU8 107 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ZNF71Q9NQZ8 489 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 SDR39U1Q9NRG7 319 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 AGPAT3Q9NRZ7 376 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 FGF21Q9NSA1 209 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 UFSP2Q9NUQ7 469 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 MED17Q9NVC6 651 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 MRPL22Q9NWU5 206 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 KLHL28Q9NXS3 571 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SLC2A8Q9NY64 477 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PTTG3PQ9NZH4 202 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 FLRT3Q9NZU0 649 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PDP1Q9P0J1 537 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 GNG12Q9UBI6 72 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PISDQ9UG56 409 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 GRID1Q9ULK0 1009 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RPH3ALQ9UNE2 315 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SLC9A8Q9Y2E8 581 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SLC6A5Q9Y345 797 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 MRPL11Q9Y3B7 192 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 COMMD3-BMI1R4GMX3 469 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RAD54L2Q9Y4B4 1467 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 RNF123Q5XPI4 1314 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 MROH5Q6ZUA9 1318 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PPIAL4CA0A0B4J2A2 164 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 A0A1B0GTQ1 180 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TTC26A0AVF1 554 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SMCO3A2RU48 225 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SHISA7A6NL88 538 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 WASHC1A8K0Z3 465 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 A8MU76 341 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 E9PMD0 336 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SLCO1B7G3V0H7 640 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 GOLGA8TH3BQL2 631 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TEX46H3BTG2 121 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 H3BTX0 84 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SGK494L7N484 410 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 NDUFS8O00217 210 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 WWP2O00308 870 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ALOX15BO15296 676 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 STX7O15400 261 aaKnown RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 KIAA0513O60268 411 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TRMUO75648 421 aaKnown RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 SLITRK3O94933 977 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 NDUFA7O95182 113 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 LGI1O95970 557 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 KRT14P02533 472 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SLC35G4P0C7Q5 338 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 FRMD6-AS1P0C7T7 363 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 FAM157CP0CG43 387 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 HSMCR30P0CW71 290 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PPIAL4GP0DN37 164 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 IGHV4-31P0DP07 118 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CPN1P15169 458 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 FOSL2P15408 326 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms