RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 SFXN3Q9BWM7 321 aa16.48■□□□□ 0.23
CLMN-202ENST00000553733 Q9N2J8 555 aa16.48■□□□□ 0.23
CLMN-202ENST00000553733 FAM120CQ9NX05 1096 aaKnown RBP16.48■□□□□ 0.23
CLMN-202ENST00000553733 GALNT8Q9NY28 637 aa16.48■□□□□ 0.23
CLMN-202ENST00000553733 MED11Q9P086 117 aa16.48■□□□□ 0.23
CLMN-202ENST00000553733 FOXD3Q9UJU5 478 aaPredicted RBP16.48■□□□□ 0.23
CLMN-202ENST00000553733 MID2Q9UJV3 735 aa16.48■□□□□ 0.23
CLMN-202ENST00000553733 ACANP16112 2415 aa16.48■□□□□ 0.23
CLMN-202ENST00000553733 SLC28A1O00337 649 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 RGS14O43566 566 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 AKAP10O43572 662 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 TBX19O60806 448 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 EFNA1P20827 205 aaPredicted RBP16.47■□□□□ 0.23
CLMN-202ENST00000553733 RFX3P48380 749 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 DSCR4P56555 118 aaPredicted RBP16.47■□□□□ 0.23
CLMN-202ENST00000553733 MRPS22P82650 360 aaKnown RBP16.47■□□□□ 0.23
CLMN-202ENST00000553733 SORDQ00796 357 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 DECR1Q16698 335 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 ZCCHC23Q6ZST2 131 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 GALNT10Q86SR1 603 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 OR5M1Q8NGP8 315 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 LINC01560Q8TB33 94 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 FAM222BQ8WU58 562 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■■■■■ 56.2
CLMN-202ENST00000553733 WNT2BQ93097 391 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 RMND5BQ96G75 393 aaPredicted RBP16.47■□□□□ 0.23
CLMN-202ENST00000553733 ZFP3Q96NJ6 502 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 TRMOQ9BU70 441 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 REEP4Q9H6H4 257 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 BAIAP2L1Q9UHR4 511 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 LGALS13Q9UHV8 139 aa16.47■□□□□ 0.23
CLMN-202ENST00000553733 FLNAP21333 2647 aaKnown RBP16.47■□□□□ 0.23
CLMN-202ENST00000553733 SETD2Q9BYW2 2564 aaPredicted RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 PRR14LQ5THK1 2151 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 TLDC2A0PJX2 215 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 PIP5K1BO14986 540 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 UTS2O95399 124 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 ACP2P11117 423 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 CREB1P16220 341 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 SUCLG1P53597 346 aaKnown RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 GRAMD1BQ3KR37 738 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 GALNTL6Q49A17 601 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 XKR7Q5GH72 579 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 ARL13AQ5H913 290 aaPredicted RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 EXOSC6Q5RKV6 272 aaKnown RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 RAET1LQ5VY80 246 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 ZAR1Q86SH2 424 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 LUZP2Q86TE4 346 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 MARCH3Q86UD3 253 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 CDC20BQ86Y33 519 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 GRAMD2AQ8IUY3 354 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 RIBC1Q8N443 379 aaPredicted RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 AENQ8WTP8 325 aaKnown RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 C1GALT1C1Q96EU7 318 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 TM9SF2Q99805 663 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 SIRT3Q9NTG7 399 aaPredicted RBP16.46■□□□□ 0.23
CLMN-202ENST00000553733 ST6GALNAC2Q9UJ37 374 aa16.46■□□□□ 0.23
CLMN-202ENST00000553733 IGLV3-32A0A0A0MS00 114 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 A0A1W2PNV4 684 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 A0A1W2PPR1 153 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 TUBAL3A6NHL2 446 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 NPHS1O60500 1241 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 SPAG7O75391 227 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 NKX2-2O95096 273 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 HK1P19367 917 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 GABRA3P34903 492 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 GANABQ14697 944 aaKnown RBP16.45■□□□□ 0.22
CLMN-202ENST00000553733 ZNHIT3Q15649 155 aaPredicted RBP16.45■□□□□ 0.22
CLMN-202ENST00000553733 EXOC3L1Q86VI1 746 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 UBQLNLQ8IYU4 475 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 AGR3Q8TD06 166 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 TCP10LQ8TDR4 215 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 NINJ1Q92982 152 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 PPCDCQ96CD2 204 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 LRRC46Q96FV0 321 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 OTUB1Q96FW1 271 aaPredicted RBP16.45■□□□□ 0.22
CLMN-202ENST00000553733 MS4A4EQ96PG1 132 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 NPAS1Q99742 590 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 KLHDC3Q9BQ90 382 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 RBM24Q9BX46 236 aaKnown RBP16.45■□□□□ 0.22
CLMN-202ENST00000553733 CXXC4Q9H2H0 198 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 CCM2LQ9NUG4 571 aaPredicted RBP16.45■□□□□ 0.22
CLMN-202ENST00000553733 NTMQ9P121 344 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 PLEKHA6Q9Y2H5 1048 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 FREM1Q5H8C1 2179 aa16.45■□□□□ 0.22
CLMN-202ENST00000553733 MAP1AP78559 2803 aaPredicted RBP16.45■□□□□ 0.22
CLMN-202ENST00000553733 OR2M5A3KFT3 312 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 SHISA8B8ZZ34 492 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 FGF4P08620 206 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 PRPS2P11908 318 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 BCKDHAP12694 445 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 GPC1P35052 558 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 CLDN20P56880 219 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 PRR5P85299 388 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 DAZAP2Q15038 168 aaPredicted RBP16.44■□□□□ 0.22
CLMN-202ENST00000553733 TMEM44Q2T9K0 475 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 MFSD12Q6NUT3 480 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 VWA1Q6PCB0 445 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 DDIASQ8IXT1 998 aa16.44■□□□□ 0.22
CLMN-202ENST00000553733 SLC16A11Q8NCK7 471 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms