RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ZNF551Q7Z340 670 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-209ENST00000553659 PIWIL3Q7Z3Z3 882 aaKnown RBP14.83□□□□□ -0.04
ACTN1-209ENST00000553659 UBE3DQ7Z6J8 389 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 ASPGQ86U10 573 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 PLD3Q8IV08 490 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 SAMD14Q8IZD0 417 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-209ENST00000553659 DHRSXQ8N5I4 330 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 OR9A4Q8NGU2 314 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 LZICQ8WZA0 190 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 TMBIM1Q969X1 311 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 NEURL3Q96EH8 262 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 NRBF2Q96F24 287 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 IL1RAPQ9NPH3 570 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 GIMAP4Q9NUV9 329 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 C19orf25Q9UFG5 118 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-209ENST00000553659 SH3BGRL2Q9UJC5 107 aa14.83□□□□□ -0.04
ACTN1-209ENST00000553659 PDZD2O15018 2839 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 IGHV3-20A0A0C4DH32 117 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 G3V2T6 193 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 RTCAO00442 366 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 ERI3O43414 337 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 WISP2O76076 250 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 NSA2O95478 260 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 ZNF682O95780 498 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 AGAP20933 346 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 MYF6P23409 242 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 ALDH9A1P49189 494 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 SNRPNP63162 240 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 MPEG1Q2M385 716 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 SLC36A3Q495N2 470 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 KRTCAP3Q53RY4 240 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 ACER2Q5QJU3 275 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 MRM1Q6IN84 353 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 TMEM64Q6YI46 380 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 LANCL3Q6ZV70 420 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 PATL1Q86TB9 770 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 ZDHHC21Q8IVQ6 265 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 BEST3Q8N1M1 668 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 CLEC4FQ8N1N0 589 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 C10orf111Q8N326 155 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 CAMKVQ8NCB2 501 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 OR51Q1Q8NH59 317 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 FAM110BQ8TC76 370 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 THAP3Q8WTV1 239 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 CIDECQ96AQ7 238 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 LURAP1Q96LR2 239 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 SORBS1Q9BX66 1292 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 MRPS26Q9BYN8 205 aaKnown RBP14.82□□□□□ -0.04
ACTN1-209ENST00000553659 NTN4Q9HB63 628 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 NDUFA13Q9P0J0 144 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 PSME2Q9UL46 239 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 ZNF835Q9Y2P0 537 aa14.82□□□□□ -0.04
ACTN1-209ENST00000553659 TMEM247A6NEH6 219 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 UPK1AO00322 258 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 TMPRSS11DO60235 418 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 SEMG1P04279 462 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 ARAFP10398 606 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 ATP5A1P25705 553 aaKnown RBP14.81□□□□□ -0.04
ACTN1-209ENST00000553659 CAPGP40121 348 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 SMSP52788 366 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 MVDP53602 400 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 PLA2G16P53816 162 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 ADORA2A-AS1P86434 159 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 HYAL2Q12891 473 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 SCARB2Q14108 478 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 C3AR1Q16581 482 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 MINDY4Q4G0A6 757 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.81□□□□□ -0.04
ACTN1-209ENST00000553659 MFSD4BQ5TF39 518 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 TTC23Q5W5X9 447 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 SAXO2Q658L1 398 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 MDS2Q8NDY4 140 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
ACTN1-209ENST00000553659 SFXN5Q8TD22 340 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 MAGEE2Q8TD90 523 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-209ENST00000553659 YTHDF1Q9BYJ9 559 aaKnown RBP14.81□□□□□ -0.04
ACTN1-209ENST00000553659 GABARAPL1Q9H0R8 117 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 PRDM7Q9NQW5 492 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 PHF11Q9UIL8 331 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 ERVK-11Q9UQG0 969 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 ORC6Q9Y5N6 252 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 CSMD1Q96PZ7 3565 aa14.81□□□□□ -0.04
ACTN1-209ENST00000553659 PDLIM1O00151 329 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 E2F6O75461 281 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 PDE9AO76083 593 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 STATHP02808 62 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 THRBP10828 461 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 ITGA2P17301 1181 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 CD96P40200 585 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 XCR1P46094 333 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 RPS6KA3P51812 740 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 RAD23AP54725 363 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 RIPPLY3P57055 190 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 DSTNP60981 165 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 CDK6Q00534 326 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 SLAMF1Q13291 335 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 TUBA3CQ13748 450 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 EXT1Q16394 746 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 MEP1AQ16819 746 aa14.8□□□□□ -0.04
ACTN1-209ENST00000553659 SPDYE7PQ495Y7 208 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms