RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 NXF5Q9H1B4 397 aaKnown RBP16.27■□□□□ 0.2
PSEN1-206ENST00000553447 C8orf4Q9NR00 106 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 SLC13A4Q9UKG4 626 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 SLC9A8Q9Y2E8 581 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 C15orf41Q9Y2V0 281 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 CHST2Q9Y4C5 530 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 LRRC42Q9Y546 428 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 CENPVL1A0A0U1RR11 272 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 M0R3H8 397 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 PEX12O00623 359 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 PCDH17O14917 1159 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 PRKNO60260 465 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 E2F6O75461 281 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 UGT2B17O75795 530 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 SEC24DO94855 1032 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 RASAL1O95294 804 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 IL7RP16871 459 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 DCTP40126 519 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 YAP1P46937 504 aaKnown RBP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 SLC26A5P58743 744 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 EEF1A1P68104 462 aaKnown RBP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 MAPK14Q16539 360 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 NRF1Q16656 503 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 LIN52Q52LA3 116 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 ZNF836Q6ZNA1 936 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 TMEM179BQ7Z7N9 219 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 LACC1Q8IV20 430 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 ESX1Q8N693 406 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 ZNF441Q8N8Z8 693 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 APCDD1LQ8NCL9 501 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 VMP1Q96GC9 406 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 WFDC6Q9BQY6 131 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 REEP1Q9H902 201 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 KCNE5Q9UJ90 142 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 ZNF223Q9UK11 482 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 FAM32AQ9Y421 112 aaKnown RBP16.26■□□□□ 0.19
PSEN1-206ENST00000553447 PCDHGA10Q9Y5H3 936 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 EXPH5Q8NEV8 1989 aa16.26■□□□□ 0.19
PSEN1-206ENST00000553447 G3V2T6 193 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 H0YJX3 145 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 J3KTA2 159 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 TO15178 435 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 ADAMDEC1O15204 470 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 IGHEP01854 428 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 RHCEP18577 417 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 TCN2P20062 427 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 RRM2P31350 389 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 NOVA1P51513 510 aaKnown RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 RNF4P78317 190 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 NHLH1Q02575 133 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 PPP1R8Q12972 351 aaKnown RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 PCOLCEQ15113 449 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 DECR1Q16698 335 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 EIPR1Q53HC9 387 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 RNF220Q5VTB9 566 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 SHQ1Q6PI26 577 aaKnown RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 TBPL2Q6SJ96 375 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 ZNF605Q86T29 641 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 HIPK1Q86Z02 1210 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 RBM45Q8IUH3 476 aaKnown RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 ZDHHC13Q8IUH4 622 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 C17orf47Q8NEP4 570 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 SDCCAG3Q96C92 435 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 LMF1Q96S06 567 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 EPYCQ99645 322 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 PIP5K1AQ99755 562 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 KLHL28Q9NXS3 571 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 SAMHD1Q9Y3Z3 626 aaKnown RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 TESMINQ9Y4I5 508 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 U3KQV3 271 aa16.25■□□□□ 0.19
PSEN1-206ENST00000553447 EP300Q09472 2414 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-206ENST00000553447 NPIPB9F8W1W9 429 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 EI24O14681 340 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 IL33O95760 270 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 NID1P14543 1247 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 FPR1P21462 350 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 NR0B1P51843 470 aaKnown RBP16.24■□□□□ 0.19
PSEN1-206ENST00000553447 PSMD4P55036 377 aaKnown RBP16.24■□□□□ 0.19
PSEN1-206ENST00000553447 SPIBQ01892 262 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 ZNF141Q15928 474 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 TCTN3Q6NUS6 607 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 HSDL2Q6YN16 418 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 DEF8Q6ZN54 512 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 STK32CQ86UX6 486 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 CYP4Z1Q86W10 505 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 NLGN4XQ8N0W4 816 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 CLIP4Q8N3C7 705 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 AMER2Q8N7J2 671 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 NLGN4YQ8NFZ3 816 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-206ENST00000553447 OR6T1Q8NGN1 323 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 HSPBAP1Q96EW2 488 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 NRBF2Q96F24 287 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 NRSN2Q9GZP1 204 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 ZNF700Q9H0M5 742 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 MRTO4Q9UKD2 239 aaKnown RBP16.24■□□□□ 0.19
PSEN1-206ENST00000553447 TCFL5Q9UL49 500 aa16.24■□□□□ 0.19
PSEN1-206ENST00000553447 MAGED1Q9Y5V3 778 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-206ENST00000553447 HS3ST3B1Q9Y662 390 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms