RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 GPR4P46093 362 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 FZD5Q13467 585 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 OAFQ86UD1 273 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 AMZ2Q86W34 360 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 VRK2Q86Y07 508 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 TIGD4Q8IY51 512 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 SAMD12Q8N8I0 201 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 OR51G2Q8NGK0 314 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 OR5K2Q8NHB8 316 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 C16orf58Q96GQ5 468 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 EMC7Q9NPA0 242 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 HCFC1R1Q9NWW0 138 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 BABAM2Q9NXR7 383 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF222Q9UK12 451 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 ELF5Q9UKW6 265 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 KCNE3Q9Y6H6 103 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 C7orf66A4D0T2 115 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 SLC22A5O76082 557 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 INHAP05111 366 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 HMGN1P05114 100 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 EIF4EP06730 217 aaKnown RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 PAICSP22234 425 aaKnown RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 TRHRP34981 398 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 TGM3Q08188 693 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 NTRK2Q16620 822 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 DECR1Q16698 335 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 TEX261Q6UWH6 196 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 ADCK2Q7Z695 626 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 CPOQ8IVL8 374 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 NKAIN4Q8IVV8 208 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 SIRT6Q8N6T7 355 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 OR2T33Q8NG76 320 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 OR56A1Q8NGH5 318 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 MARVELD3Q96A59 401 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 PPIL3Q9H2H8 161 aaKnown RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 NUDT15Q9NV35 164 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 KLHL28Q9NXS3 571 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF624Q9P2J8 865 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 PCYT1BQ9Y5K3 369 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 U3KQ87 197 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 LRRK1Q38SD2 2015 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 TRAV6A0A075B6T7 132 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 LOC105371267A0A1B0GV96 52 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 MEN1O00255 615 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 SOCS6O14544 535 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 EEF1E1O43324 174 aaKnown RBP16.41■□□□□ 0.22
SYNE3-202ENST00000553340 LCMT2O60294 686 aaKnown RBP16.41■□□□□ 0.22
SYNE3-202ENST00000553340 SLC2A10O95528 541 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 TFPIP10646 304 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 F8A1P23610 371 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 HOXD10P28358 340 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 DPTQ07507 201 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 CDC73Q6P1J9 531 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 IL20RBQ6UXL0 311 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF620Q6ZNG0 422 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 KRT74Q7RTS7 529 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 NRMQ8IXM6 262 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ACBD7Q8N6N7 88 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 DTX3Q8N9I9 347 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 SCMH1Q96GD3 660 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ART5Q96L15 291 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 GHITMQ9H3K2 345 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 HINT3Q9NQE9 182 aaKnown RBP16.41■□□□□ 0.22
SYNE3-202ENST00000553340 IL20RAQ9UHF4 553 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 COL4A3Q01955 1670 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 BTN3A3O00478 584 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 CLEC3AO75596 197 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 NFATC1O95644 943 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 PRNPP04156 253 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ST8SIA6P61647 398 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ARHGAP15Q53QZ3 475 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 TOR2AQ5JU69 321 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF793Q6ZN11 406 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 PLEKHM3Q6ZWE6 761 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
SYNE3-202ENST00000553340 CCDC116Q8IYX3 515 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 SIX5Q8N196 739 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 MOAP1Q96BY2 351 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ZG16BQ96DA0 208 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 TCEAL4Q96EI5 215 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 DPAGT1Q9H3H5 408 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 ZFP64Q9NPA5 681 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 WNT6Q9Y6F9 365 aa16.41■□□□□ 0.22
SYNE3-202ENST00000553340 LINC00862A6NCI5 91 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 B8ZZF3 427 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.4■□□□□ 0.22
SYNE3-202ENST00000553340 J3QRE1 110 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 ANXA3P12429 323 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 NDUFV2P19404 249 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 NPR2P20594 1047 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 BTCP35070 178 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 RAB8AP61006 207 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 PRR5P85299 388 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 SLC9A5Q14940 896 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 TEAD2Q15562 447 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 CCNJQ5T5M9 372 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 HACD4Q5VWC8 232 aa16.4■□□□□ 0.22
SYNE3-202ENST00000553340 IDO2Q6ZQW0 420 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 238.5 ms