RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 IGHV4-39P01824 125 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 RPLP0P05388 317 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 APOA4P06727 396 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 KRT3P12035 628 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CCL4P13236 92 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SELLP14151 372 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CD1EP15812 388 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 GNAZP19086 355 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PSMA2P25787 234 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 HLA-FP30511 346 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 HNF4AP41235 474 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 GARSP41250 739 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PGFP49763 221 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 EIF2B2P49770 351 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 BCAP31P51572 246 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ARFIP1P53367 373 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 RPS3AP61247 264 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ATP6V0D1P61421 351 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CCL7P80098 99 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 IL1RL1Q01638 556 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CEBPZQ03701 1054 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 RAD51Q06609 339 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 TMEM132DQ14C87 1099 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CST6Q15828 149 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 UGP2Q16851 508 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PARP6Q2NL67 630 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 KRTCAP3Q53RY4 240 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ZRANB3Q5FWF4 1079 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 HAUS3Q68CZ6 603 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PM20D1Q6GTS8 502 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 OR6B2Q6IFH4 312 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 NIPAL1Q6NVV3 410 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ARHGAP11AQ6P4F7 1023 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 KLHL35Q6PF15 583 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PAPD4Q6PIY7 484 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 MACC1Q6ZN28 852 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 KRT74Q7RTS7 529 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PEX26Q7Z412 305 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ZC3H3Q8IXZ2 948 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ARFGAP2Q8N6H7 521 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 MLKLQ8NB16 471 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 LHFPL5Q8TAF8 219 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 AGR3Q8TD06 166 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ADAMTS16Q8TE57 1224 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 NAT14Q8WUY8 206 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 TMEM255BQ8WV15 326 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 RAB7BQ96AH8 199 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 DGCR14Q96DF8 476 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ARHGEF26Q96DR7 871 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PIWIL1Q96J94 861 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 VPS39Q96JC1 886 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 RANBP9Q96S59 729 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ACBD6Q9BR61 282 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 NUDT16L1Q9BRJ7 211 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SLC26A6Q9BXS9 759 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 TRIM45Q9H8W5 580 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 ANKZF1Q9H8Y5 726 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 MARCH7Q9H992 704 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 GPN2Q9H9Y4 310 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 KCNK13Q9HB14 408 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SYTL2Q9HCH5 934 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 UBA2Q9UBT2 640 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CD300AQ9UGN4 299 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SNX7Q9UNH6 387 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 PRRC2CQ9Y520 2896 aaKnown RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 DCHS2Q6V1P9 2916 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ANKUB1A6NFN9 424 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CCT8L1PA6NM43 557 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC31A1O15431 190 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CLDN3O15551 220 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 LRRTM2O43300 516 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 LATO43561 262 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CIDEAO60543 219 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 MAGEC1O60732 1142 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 HSF2BPO75031 334 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 MED24O75448 989 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PSIP1O75475 530 aaKnown RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 TOM1L1O75674 476 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PIGNO95427 931 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CAPN1P07384 714 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 COX6B1P14854 86 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ANPEPP15144 967 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF23P17027 643 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 UGT1A3P35503 534 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC9A3P48764 834 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 STARP49675 285 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CCR9P51686 369 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 TKTL1P51854 596 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 METAP1P53582 386 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 C16orf72Q14CZ0 275 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 C6orf163Q5TEZ5 329 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 TMEM198Q66K66 360 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC35E4Q6ICL7 350 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 LCN10Q6JVE6 187 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SHQ1Q6PI26 577 aaKnown RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 C4orf50Q6ZRC1 276 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 NET1Q7Z628 596 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLFN11Q7Z7L1 901 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms