RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 FAM219BQ5XKK7 198 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 REP15Q6BDI9 236 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 HSD11B1LQ7Z5J1 315 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 CEACAM19Q7Z692 300 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 SYT14Q8NB59 555 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 FNDC8Q8TC99 324 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 NPRL2Q8WTW4 380 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 RPL3LQ92901 407 aaKnown RBP4.1□□□□□ -1.75
SCFD1-209ENST00000553280 OPRPNQ99935 248 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-209ENST00000553280 TMEM121Q9BTD3 319 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 APMAPQ9HDC9 416 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 SCRT2Q9NQ03 307 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 TXLNGQ9NUQ3 528 aa4.1□□□□□ -1.75
SCFD1-209ENST00000553280 MRPL39Q9NYK5 338 aaKnown RBP4.1□□□□□ -1.75
SCFD1-209ENST00000553280 ARPC3O15145 178 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 STX7O15400 261 aaKnown RBP4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SEMA4FO95754 770 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 IL1BP01584 269 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CAPN1P07384 714 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 TRIM49P0CI25 452 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 TRIM49CP0CI26 452 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 BCKDHAP12694 445 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ZNF44P15621 663 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 TBXA2RP21731 343 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 LMO2P25791 158 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CAPGP40121 348 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 MAGEA5P43359 124 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SULT1E1P49888 294 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ATP4BP51164 291 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 AIF1P55008 147 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 NTHL1P78549 312 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CHI3L2Q15782 390 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ZIC1Q15915 447 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ACER2Q5QJU3 275 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 DCST2Q5T1A1 773 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SEL1L2Q5TEA6 688 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ATF7IP2Q5U623 682 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SLX4IPQ5VYV7 408 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 PMF1Q6P1K2 205 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 STAC2Q6ZMT1 411 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 LRRC43Q8N309 656 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SUMF1Q8NBK3 374 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 FLVCR1-AS1Q8TAF5 88 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 RAB3CQ96E17 227 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ATF6BQ99941 703 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CHCHD5Q9BSY4 110 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SYT11Q9BT88 431 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CCDC28BQ9BUN5 200 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 POLR3FQ9H1D9 316 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-209ENST00000553280 TUBB1Q9H4B7 451 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ABCC13Q9NSE7 274 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CTSZQ9UBR2 303 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 ANAPC7Q9UJX3 599 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 BARX2Q9UMQ3 279 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-209ENST00000553280 CLEC4AQ9UMR7 237 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 MRPL11Q9Y3B7 192 aaKnown RBP4.09□□□□□ -1.75
SCFD1-209ENST00000553280 SLCO1B1Q9Y6L6 691 aa4.09□□□□□ -1.75
SCFD1-209ENST00000553280 A0A1W2PNV4 684 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 RPL37AP8A6NKH3 93 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 CCDC169A6NNP5 214 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 A8MXK9 166 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 BTN3A3O00478 584 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 IGHV3-9P01782 118 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 IGFBP1P08833 259 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-209ENST00000553280 HBQ1P09105 142 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 WNT2P09544 360 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 ZNF10P21506 573 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-209ENST00000553280 GSK3BP49841 420 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 TNFRSF17Q02223 184 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 ACY1Q03154 408 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 ZMYND11Q15326 602 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 EXOC3L2Q2M3D2 409 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 VWA2Q5GFL6 755 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 C9orf66Q5T8R8 295 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 TMEM225Q6GV28 225 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 ARMCX5Q6P1M9 558 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 SCYL2Q6P3W7 929 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 EMBQ6PCB8 327 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 RFWD3Q6PCD5 774 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 ZNF613Q6PF04 617 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 SYT10Q6XYQ8 523 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 PRSS48Q7RTY5 328 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 TMEM17Q86X19 198 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 CATSPER3Q86XQ3 398 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 SLC38A6Q8IZM9 456 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 ARL14Q8N4G2 192 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 C4orf32Q8N8J7 132 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 OR13C2Q8NGS9 318 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 CRYGNQ8WXF5 182 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 FAM3CQ92520 227 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 CNDP1Q96KN2 507 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 JPT2Q9H910 190 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 GNG12Q9UBI6 72 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 CRLS1Q9UJA2 301 aa4.08□□□□□ -1.76
SCFD1-209ENST00000553280 PTBP2Q9UKA9 531 aaKnown RBP4.08□□□□□ -1.76
SCFD1-209ENST00000553280 MYH15Q9Y2K3 1946 aa4.07□□□□□ -1.76
SCFD1-209ENST00000553280 METTL21EPA6NDL7 271 aa4.07□□□□□ -1.76
SCFD1-209ENST00000553280 FOXI3A8MTJ6 420 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms