RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ZSCAN4Q8NAM6 433 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-208ENST00000553278 FAM184AQ8NB25 1140 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 MIPOL1Q8TD10 442 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 LYZL4Q96KX0 146 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 ELL3Q9HB65 397 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-208ENST00000553278 B3GAT2Q9NPZ5 323 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 TAS2R16Q9NYV7 291 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 PNPLA6Q8IY17 1366 aa4.9□□□□□ -1.63
SCFD1-208ENST00000553278 FAM25EA8MYX2 175 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 K7EQD1 137 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 WRBO00258 174 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 TM9SF1O15321 606 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 PGK1P00558 417 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 H2BFMP0C1H6 154 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 PRSS56P0CW18 603 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 PLA2G2AP14555 144 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 AOC1P19801 751 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 SYKP43405 635 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 CASP4P49662 377 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 NDST2P52849 883 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 HAND2P61296 217 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 BDH1Q02338 343 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 ARL16Q0P5N6 197 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 KIAA0141Q14154 515 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-208ENST00000553278 TMEM187Q14656 261 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 KNOP1Q1ED39 458 aaKnown RBP4.89□□□□□ -1.63
SCFD1-208ENST00000553278 OR4F3Q6IEY1 312 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF771Q7L3S4 317 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-208ENST00000553278 HSD11B1LQ7Z5J1 315 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 CATSPERDQ86XM0 798 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 CCDC50Q8IVM0 306 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 SPATA4Q8NEY3 305 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 OR10A7Q8NGE5 316 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 OR52B6Q8NGF0 335 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 OR1F12Q8NHA8 337 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 M1APQ8TC57 530 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 SLC22A8Q8TCC7 542 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 SPPL2AQ8TCT8 520 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF524Q96C55 264 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 C12orf66Q96MD2 445 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 CABLES2Q9BTV7 478 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 TSSK1BQ9BXA7 367 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 LRRN3Q9H3W5 708 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 WDR41Q9HAD4 459 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 ZFP14Q9HCL3 533 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 SLC2A8Q9NY64 477 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 GMPPBQ9Y5P6 360 aa4.89□□□□□ -1.63
SCFD1-208ENST00000553278 ARPC4-TTLL3A0A0A6YYG9 625 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 A0A1B0GVL5 298 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 BOLA2-SMG1P6H3BVE0 249 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ACOT8O14734 319 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 NBR2O15453 112 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 KRT14P02533 472 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 HBQ1P09105 142 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CD48P09326 243 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 HOXB7P09629 217 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ACADSP16219 412 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 NCK1P16333 377 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 XRCC1P18887 633 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CASQ1P31415 396 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 SNRPD1P62314 119 aaKnown RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 GSTO1P78417 241 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 PHEXP78562 749 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 OTUD4Q01804 1114 aaKnown RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 RGS1Q08116 209 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 TGM3Q08188 693 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 RBBP5Q15291 538 aaKnown RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 UPP1Q16831 310 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF324BQ6AW86 544 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ATL3Q6DD88 541 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ACSM5Q6NUN0 579 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 LCLAT1Q6UWP7 414 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 VITQ6UXI7 678 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 APOOLQ6UXV4 268 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 C3P1Q6ZMU1 363 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 PSTKQ8IV42 348 aaKnown RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 GPR137CQ8N3F9 429 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CEP112Q8N8E3 955 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CCDC148Q8NFR7 591 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 KCNG3Q8TAE7 436 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CNIH3Q8TBE1 160 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 RCHY1Q96PM5 261 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF300Q96RE9 604 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 COPS8Q99627 209 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 EPYCQ99645 322 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 SLC6A7Q99884 636 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 FAM173AQ9BQD7 235 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CLEC7AQ9BXN2 247 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 DGCR6LQ9BY27 220 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 DUSP16Q9BY84 665 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 PARD6BQ9BYG5 372 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 NXF5Q9H1B4 397 aaKnown RBP4.88□□□□□ -1.63
SCFD1-208ENST00000553278 HIPK2Q9H2X6 1198 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 SP140LQ9H930 580 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 NEK6Q9HC98 313 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms