RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SERHL2Q9H4I8 314 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 TEX10Q9NXF1 929 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 EIF3KQ9UBQ5 218 aaKnown RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 TAC3Q9UHF0 121 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 RWDD3Q9Y3V2 267 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 SLC5A10A0PJK1 596 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 H3BUI4 141 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 STK25O00506 426 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 SEC14L5O43304 696 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 CHP2O43745 196 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 CD3GP09693 182 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 ACADMP11310 421 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 CXCL3P19876 107 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 STOMP27105 288 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 VIPR1P32241 457 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 SLC9B2Q86UD5 537 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 OR9A1PQ8NGU1 263 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 MACROD1Q9BQ69 325 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 KXD1Q9BQD3 176 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 TTTY10Q9BZA0 68 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 RNF32Q9H0A6 362 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 DDX31Q9H8H2 851 aaKnown RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 ISG20L2Q9H9L3 353 aaKnown RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 AHSPQ9NZD4 102 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 P2RX2Q9UBL9 471 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 NTNG1Q9Y2I2 539 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 EXOSC1Q9Y3B2 195 aaKnown RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 A0A087WUU8 490 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TMEM129A0AVI4 362 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 FOXE1O00358 373 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 SSNA1O43805 119 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TIMP2P16035 220 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 ZNF30P17039 623 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 POLR2CP19387 275 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 DDCP20711 480 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 SHC1P29353 583 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 KLHL12Q53G59 568 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PRAMEF14Q5SWL7 426 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PRAMEF13Q5VWM6 474 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 ARL9Q6T311 187 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 IDO2Q6ZQW0 420 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 KLHL36Q8N4N3 616 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 OR11H4Q8NGC9 324 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 OR5P2Q8WZ92 322 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TRMT61BQ9BVS5 477 aaKnown RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PLXNB3Q9ULL4 1909 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TRDV1A0A1B0GX56 115 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 H7BY64 318 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 SOCS6O14544 535 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TRIM3O75382 744 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 DRD5P21918 477 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 FCARP24071 287 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PSMB5P28074 263 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 RNF144AP50876 292 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PER3P56645 1201 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 OR10A3P58181 314 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 RPS7P62081 194 aaKnown RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PIP5KL1Q5T9C9 394 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 CEP76Q8TAP6 659 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PIGKQ92643 395 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 C12orf66Q96MD2 445 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 PRAP1Q96NZ9 151 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 MED18Q9BUE0 208 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.58□□□□□ -0.565e-6■■□□□ 13.7
HDAC7-230ENST00000552960 CLEC4MQ9H2X3 399 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 MED20Q9H944 212 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 B3GNT2Q9NY97 397 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 NDOR1Q9UHB4 597 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 U3KQ87 197 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 K7ESM1 405 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 FAM157BP0CG42 384 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 SLC3A1Q07837 685 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 ANGPT1Q15389 498 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 ZNF750Q32MQ0 723 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 VITQ6UXI7 678 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 GPR135Q8IZ08 494 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TBC1D19Q8N5T2 526 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 AMER3Q8N944 861 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 OR11H7Q8NGC8 314 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 CREB3L1Q96BA8 519 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TM4SF18Q96CE8 201 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 ZG16BQ96DA0 208 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 BBS4Q96RK4 519 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 C17orf62Q9BQA9 187 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 C1QTNF6Q9BXI9 259 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 CHIAQ9BZP6 476 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 SPRTNQ9H040 489 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 A4GALTQ9NPC4 353 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 DIABLOQ9NR28 239 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 CUEDC1Q9NWM3 386 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 MRPL15Q9P015 296 aaKnown RBP11.58□□□□□ -0.56
HDAC7-230ENST00000552960 SPATA2Q9UM82 520 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 RASD1Q9Y272 281 aa11.58□□□□□ -0.56
HDAC7-230ENST00000552960 TCF20Q9UGU0 1960 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 CACNA1CQ13936 2221 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 TEX13CA0A0J9YWL9 993 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 ACP5P13686 325 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms