RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RAB3IL1Q8TBN0 382 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 C16orf78Q8WTQ4 265 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 OMA1Q96E52 524 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 LCORQ96JN0 433 aaPredicted RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 OSBPL11Q9BXB4 747 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 EBPLQ9BY08 206 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF395Q9H8N7 513 aaPredicted RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 GALNT9Q9HCQ5 603 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 MAT2BQ9NZL9 334 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 CLCF1Q9UBD9 225 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 DLGAP4Q9Y2H0 992 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 WBP11Q9Y2W2 641 aaKnown RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 MRPS18CQ9Y3D5 142 aaKnown RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 PTGDR2Q9Y5Y4 395 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 KIAA1549Q9HCM3 1950 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 FN1P02751 2386 aaKnown RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 FAM171A2A8MVW0 826 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 UGT2B11O75310 529 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 TNFSF13O75888 250 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 CBX7O95931 251 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 HEXAP06865 529 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 IL3P08700 152 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 CSNK2A2P19784 350 aaPredicted RBP10.74□□□□□ -0.69
CKAP4-202ENST00000552828 ADSLP30566 484 aaPredicted RBP10.74□□□□□ -0.69
CKAP4-202ENST00000552828 PPICP45877 212 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 ALDH9A1P49189 494 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 EMDP50402 254 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 LHX2P50458 406 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF763Q0D2J5 394 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 KIAA0040Q15053 153 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 FAM111BQ6SJ93 734 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 CLEC9AQ6UXN8 241 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 LRRC75A-AS1Q8N1F1 130 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF781Q8N8C0 355 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 SIMC1Q8NDZ2 872 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 OR2T11Q8NH01 316 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 INTS12Q96CB8 462 aaKnown RBP10.74□□□□□ -0.69
CKAP4-202ENST00000552828 PPP3R2Q96LZ3 170 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 SORT1Q99523 831 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 PIP5K1AQ99755 562 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 ITPAQ9BY32 194 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 C20orf27Q9GZN8 174 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 MANSC1Q9H8J5 431 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 MED4Q9NPJ6 270 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 SERHLQ9NQF3 203 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 THAP1Q9NVV9 213 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 TMED5Q9Y3A6 229 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 TESMINQ9Y4I5 508 aa10.74□□□□□ -0.69
CKAP4-202ENST00000552828 POLR3HQ9Y535 204 aaPredicted RBP10.74□□□□□ -0.69
CKAP4-202ENST00000552828 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 PRAMEF25A6NGN4 478 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 OR6C70A6NIJ9 312 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 H0Y3Z8 333 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 LSM1O15116 133 aaKnown RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 ARHGEF9O43307 516 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 HCRTR2O43614 444 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 SKAP2O75563 359 aaPredicted RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 ERAL1O75616 437 aaKnown RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 CRHP06850 196 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF708P17019 499 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 SRD5A2P31213 254 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 CPA2P48052 419 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 CLDN18P56856 261 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 C2orf80Q0P641 193 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 PLCXD2Q0VAA5 305 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 EXOSC7Q15024 291 aaKnown RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 POU4F3Q15319 338 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 NNATQ16517 81 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 BCL2A1Q16548 175 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 GALNTL6Q49A17 601 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 ATP6AP1LQ52LC2 224 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 XKR7Q5GH72 579 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 Q71RC1 249 aaPredicted RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 LUZP2Q86TE4 346 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 IFNEQ86WN2 208 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 PLCZ1Q86YW0 608 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 OR14L1PQ8NHC6 308 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 CDC26Q8NHZ8 85 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 RNF138Q8WVD3 245 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 KLHL29Q96CT2 875 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF681Q96N22 645 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 BRINP2Q9C0B6 783 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 MYNNQ9NPC7 610 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 TAS2R10Q9NYW0 307 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 KLRF1Q9NZS2 232 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 HEY2Q9UBP5 337 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 PRODH2Q9UF12 536 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 NDRG3Q9UGV2 375 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 BCAP29Q9UHQ4 241 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 HAO1Q9UJM8 370 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 UTS2RQ9UKP6 389 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 PACSIN3Q9UKS6 424 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 MAPRE3Q9UPY8 281 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 EIF3LQ9Y262 564 aaKnown RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 GPR55Q9Y2T6 319 aaPredicted RBP10.73□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF780BQ9Y6R6 833 aa10.73□□□□□ -0.69
CKAP4-202ENST00000552828 FREM3P0C091 2139 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms