RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SDHAF3Q9NRP4 125 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 GIN1Q9NXP7 522 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 PPP4R1LQ9P1A2 415 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 BTNL2Q9UIR0 455 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 BCKDKO14874 412 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 KCNK2O95069 426 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 UTS2O95399 124 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 LDLRP01130 860 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 IL6P05231 212 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 HPGDP15428 266 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 UQCRC2P22695 453 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 PTPN6P29350 595 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 IL12AP29459 219 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 CHI3L1P36222 383 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 PHC1P78364 1004 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 STX5Q13190 355 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 FNDC7Q5VTL7 733 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 C6orf120Q7Z4R8 191 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 FGD2Q7Z6J4 655 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 GALNT10Q86SR1 603 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 PLCZ1Q86YW0 608 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 CHERPQ8IWX8 916 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 CCDC115Q96NT0 180 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 PANX1Q96RD7 426 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 EBF4Q9BQW3 602 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 GPATCH2Q9NW75 528 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 ACAD8Q9UKU7 415 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 FLNCQ14315 2725 aa16.87■□□□□ 0.29
PRPF40B-216ENST00000552301 USP9XQ93008 2570 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 SPTBN1Q01082 2364 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 C15orf38-AP3S2A0A0A6YYH1 394 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 A0A1B0GVC2 190 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 DUXAA6NLW8 204 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 FIGNL2A6NMB9 653 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 EDF1O60869 148 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 SCN2BO60939 215 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 CBR3O75828 277 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 MATN1P21941 496 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 LCN1P31025 176 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 RPS26P62854 115 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 WLSQ5T9L3 541 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 NEIL3Q8TAT5 605 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 THOC1Q96FV9 657 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 OR7D2Q96RA2 312 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 SLC35A5Q9BS91 424 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 UBQLN3Q9H347 655 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 TP63Q9H3D4 680 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 RMND5AQ9H871 391 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 HHATLQ9HCP6 504 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 FLRT3Q9NZU0 649 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 DKKL1Q9UK85 242 aa16.86■□□□□ 0.29
PRPF40B-216ENST00000552301 FADS1O60427 444 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 IGKV1D-16P01601 117 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 HPNP05981 417 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 POLR2JP52435 117 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 GRAMD1BQ3KR37 738 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 EXOSC6Q5RKV6 272 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 DCST2Q5T1A1 773 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 CCNJQ5T5M9 372 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 DOLPP1Q86YN1 238 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 CLEC4FQ8N1N0 589 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 WDSUB1Q8N9V3 476 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 OR14L1PQ8NHC6 308 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 RNF138Q8WVD3 245 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 NTNG2Q96CW9 530 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 SIKE1Q9BRV8 207 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 NPHS2Q9NP85 383 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 DCTN4Q9UJW0 460 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 NCKAP5O14513 1909 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 FREM3P0C091 2139 aa16.85■□□□□ 0.29
PRPF40B-216ENST00000552301 SPTAN1Q13813 2472 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 FAM234BA2RU67 622 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 CCDC154A6NI56 674 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 E9PLN8 166 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 SCDO00767 359 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 RFXANKO14593 260 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 ZG16O60844 167 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 AGR2O95994 175 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 AK1P00568 194 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 TROVE2P10155 538 aaKnown RBP eCLIP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 KHKP50053 298 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 ANXA11P50995 505 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 TIGD2Q4W5G0 525 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 EIPR1Q53HC9 387 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 WIPI1Q5MNZ9 446 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 ATAD3BQ5T9A4 648 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 OR5M10Q6IEU7 315 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 RPTNQ6XPR3 784 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 DNAJC14Q6Y2X3 702 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 C3P1Q6ZMU1 363 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 ZNF621Q6ZSS3 439 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 MSANTD1Q6ZTZ1 278 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 C16orf62Q7Z3J2 963 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 YRDCQ86U90 279 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 MARCH3Q86UD3 253 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 FAM83FQ8NEG4 500 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 OR5D16Q8NGK9 328 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 OR5M9Q8NGP3 310 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms