RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 HK1P19367 917 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 PSMB1P20618 241 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 NT5EP21589 574 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 USF1P22415 310 aaPredicted RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 GRK2P25098 689 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 GALNSP34059 522 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CASP2P42575 452 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 MAGEA3P43357 314 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 SLC6A8P48029 635 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 HSPA7P48741 367 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CDH11P55287 796 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CLDN20P56880 219 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 EEFSECP57772 596 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 C21orf58P58505 322 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 DSCR9P59020 149 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 RPS3AP61247 264 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 IRX1P78414 480 aaPredicted RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 HMGCS1Q01581 520 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 BSPH1Q075Z2 132 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CHIT1Q13231 466 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 LAPTM5Q13571 262 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 DDX39BQ13838 428 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ZNF460Q14592 562 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 EXOSC7Q15024 291 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 TSC22D1Q15714 1073 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 PDK4Q16654 411 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 NRF1Q16656 503 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 HIST2H2ACQ16777 129 aaPredicted RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 PAGE2BQ5JRK9 111 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 C6orf163Q5TEZ5 329 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 KHDRBS2Q5VWX1 349 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 HIST2H2AA3Q6FI13 130 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 FAM45BPQ6NSW5 357 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 FAM111BQ6SJ93 734 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 RAD9BQ6WBX8 426 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ADAMTSL2Q86TH1 951 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 RFLNBQ8N5W9 214 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 MCUQ8NE86 351 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 C17orf47Q8NEP4 570 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ADCY4Q8NFM4 1077 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 STEAP2Q8NFT2 490 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 OR7G1Q8NGA0 311 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 OR5M1Q8NGP8 315 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 OR6K3Q8NGY3 331 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 SGMS2Q8NHU3 365 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 FAM45AQ8TCE6 357 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ANKRD49Q8WVL7 239 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 TMBIM1Q969X1 311 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 RGMAQ96B86 450 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 S100PBPQ96BU1 408 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ZMYND19Q96E35 227 aaPredicted RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 DTNBP1Q96EV8 351 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 WDR34Q96EX3 536 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CMTM7Q96FZ5 175 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 LCORQ96JN0 433 aaPredicted RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 COL21A1Q96P44 957 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CACNG6Q9BXT2 260 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 PRRG4Q9BZD6 226 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 TRIM2Q9C040 744 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 STMN4Q9H169 189 aaPredicted RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 WDR41Q9HAD4 459 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 FOLH1BQ9HBA9 442 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 FANCFQ9NPI8 374 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 PLSCR4Q9NRQ2 329 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 LYARQ9NX58 379 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CISD1Q9NZ45 108 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 BCAP29Q9UHQ4 241 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 GPR52Q9Y2T5 361 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 MRPS18CQ9Y3D5 142 aaKnown RBP4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ZNF337Q9Y3M9 751 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ASB4Q9Y574 426 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 CAPN6Q9Y6Q1 641 aa4.78□□□□□ -1.64
HOXB3-213ENST00000552000 ARHGAP32A7KAX9 2087 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 OR2M5A3KFT3 312 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 DPRXA6NFQ7 191 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 SHISA9B4DS77 424 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 ALG1L2C9J202 215 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 H3BML4 177 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 PLPP1O14494 284 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 ACOX3O15254 700 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 CCNT2O60583 730 aaKnown RBP4.77□□□□□ -1.65
HOXB3-213ENST00000552000 RAMP1O60894 148 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 STK16O75716 305 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 NTN1O95631 604 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 KRT14P02533 472 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 FGGP02679 453 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 PF4P02776 101 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 FESP07332 822 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 FCGR2AP12318 317 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 CPMP14384 443 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 PGAM1P18669 254 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 EPORP19235 508 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 S1PR1P21453 382 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 IL32P24001 234 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 PIK3R1P27986 724 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 SRP14P37108 136 aaKnown RBP4.77□□□□□ -1.65
HOXB3-213ENST00000552000 GIPRP48546 466 aa4.77□□□□□ -1.65
HOXB3-213ENST00000552000 XKP51811 444 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms