RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 MTERF1Q99551 399 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF670Q9BS34 389 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZSCAN5AQ9BUG6 496 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 FICDQ9BVA6 458 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 THAP2Q9H0W7 228 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SLC25A51Q9H1U9 297 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SLCO5A1Q9H2Y9 848 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 LIME1Q9H400 295 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DHX35Q9H5Z1 703 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 HAUS4Q9H6D7 363 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SYNDIG1Q9H7V2 258 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 WDR54Q9H977 334 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SEBOXQ9HB31 216 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PCDH9Q9HC56 1237 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NT5MQ9NPB1 228 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 RBM22Q9NW64 420 aaKnown RBP eCLIP2.17□□□□□ -2.061e-9■□□□□ 8.7
CPSF6-207ENST00000551516 GPR83Q9NYM4 423 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 FBXL2Q9UKC9 423 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 RARRES3Q9UL19 164 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 KLHL20Q9Y2M5 609 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PRSS21Q9Y6M0 314 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 MDC1Q14676 2089 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DOCK10Q96BY6 2186 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TRRAPQ9Y4A5 3859 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZGRF1Q86YA3 2104 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ANKRD12Q6UB98 2062 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PKD1L1Q8TDX9 2849 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 C1orf232A0A0U1RR37 186 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 FEZF1A0PJY2 475 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CTAGE15A4D2H0 777 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 KRT87PA6NCN2 255 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OR6C74A6NCV1 312 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 URADA6NGE7 173 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 DNAJC9-AS1A6NH13 148 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 FAM90A26D6RGX4 464 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 J3QR06 171 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 DFFAO00273 331 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ANKRD28O15084 1053 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SCRG1O75711 98 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PROSCO94903 275 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CDK14O94921 469 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SLC25A14O95258 325 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 HSPA4LO95757 839 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CRYABP02511 175 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PRSS56P0CW18 603 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 IGHV4-30-4P0DP06 118 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 COX6A1P12074 109 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SKILP12757 684 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 UGT2B7P16662 529 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 KDELR1P24390 212 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PSMA2P25787 234 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 NMBRP28336 390 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 HTR1EP28566 365 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 APOBEC1P41238 236 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 NSFP46459 744 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CD151P48509 253 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PCYT1AP49585 367 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 RAB28P51157 221 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF41P51814 821 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 GSDMDP57764 484 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 UBE2HP62256 183 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SNRPEP62304 92 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CACNG1Q06432 222 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SPOCK1Q08629 439 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE2BQ13066 116 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 MFAP5Q13361 173 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 RAPSNQ13702 412 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 C3AR1Q16581 482 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SYT16Q17RD7 645 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SLC5A12Q1EHB4 618 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE2EQ4V326 116 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF628Q5EBL2 1059 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SIRPB2Q5JXA9 342 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 LRRC38Q5VT99 294 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 RTL6Q6ICC9 239 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF425Q6IV72 752 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE2AQ6NT46 116 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 DNAJC24Q6P3W2 148 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SCYL2Q6P3W7 929 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PAPD4Q6PIY7 484 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 TMEM220Q6QAJ8 160 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SPESP1Q6UW49 350 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF534Q76KX8 674 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CTAGE6Q86UF2 777 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 DOLPP1Q86YN1 238 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CEP97Q8IW35 865 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 FOXRED2Q8IWF2 684 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PM20D2Q8IYS1 436 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 IQCKQ8N0W5 287 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 RASGEF1CQ8N431 466 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 RPRMLQ8N4K4 120 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SLC5A8Q8N695 610 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 GCSAMQ8N6F7 178 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PRR26Q8N8Z3 221 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZBTB8BQ8NAP8 495 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC112Q8NEF3 446 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 LPCAT1Q8NF37 534 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OR52E1Q8NGJ3 308 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OR10S1Q8NGN2 331 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OR13J1Q8NGT2 312 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms