RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CLDN16Q9Y5I7 305 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 SYNDIG1LA6NDD5 238 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 TLCD2A6NGC4 264 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 HRO43593 1189 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 STX11O75558 287 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 CDK4P11802 303 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 DHPSP49366 369 aaPredicted RBP19.47■□□□□ 0.71
PRDM4-205ENST00000550376 TMBIM6P55061 237 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 FOXL2P58012 376 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 ALDH6A1Q02252 535 aaKnown RBP19.47■□□□□ 0.71
PRDM4-205ENST00000550376 TUBA3CQ13748 450 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 MRPL2Q5T653 305 aaKnown RBP19.47■□□□□ 0.71
PRDM4-205ENST00000550376 SIGLEC11Q96RL6 698 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 PRTFDC1Q9NRG1 225 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 SLC7A7Q9UM01 511 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 CACNA1EQ15878 2313 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 A0A087WV62 115 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 SYT5O00445 386 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 AP3D1O14617 1153 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 GIMD1P0DJR0 217 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 GPR4P46093 362 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 PSG6Q00889 435 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 LARS2Q15031 903 aaKnown RBP19.47■□□□□ 0.71
PRDM4-205ENST00000550376 GDF7Q7Z4P5 450 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 SLC38A4Q969I6 547 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 PI4KAP42356 2102 aa19.47■□□□□ 0.71
PRDM4-205ENST00000550376 IGHV1OR21-1A0A087WYE8 117 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 A8MUA0 341 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 TMEM150CB9EJG8 249 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF701M0R085 212 aaPredicted RBP19.46■□□□□ 0.71
PRDM4-205ENST00000550376 IGKV1D-16P01601 117 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 IFNA16P05015 189 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 FUT1P19526 365 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 CD1CP29017 333 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 EEF1A1P68104 462 aaKnown RBP19.46■□□□□ 0.71
PRDM4-205ENST00000550376 DOC2BQ14184 412 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 GINS1Q14691 196 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 PRSS58Q8IYP2 241 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 STX19Q8N4C7 294 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 PCED1AQ9H1Q7 454 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 TLX2O43763 284 aaPredicted RBP19.46■□□□□ 0.71
PRDM4-205ENST00000550376 PRKYO43930 277 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 CSF2RBP32927 897 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 EMDP50402 254 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF136P52737 540 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 VBP1P61758 197 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 BNC1Q01954 994 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 CTF1Q16619 201 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 NDUFA9Q16795 377 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 DHRS4L2Q6PKH6 230 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 SLC36A4Q6YBV0 504 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 NRMQ8IXM6 262 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF619Q8N2I2 560 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 IPCEF1Q8WWN9 437 aaPredicted RBP19.46■□□□□ 0.71
PRDM4-205ENST00000550376 ZDHHC12Q96GR4 267 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 SLC41A3Q96GZ6 507 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 OCEL1Q9H607 264 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 NECTIN3Q9NQS3 549 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 GPR52Q9Y2T5 361 aa19.46■□□□□ 0.71
PRDM4-205ENST00000550376 KCNK2O95069 426 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 AGR2O95994 175 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 CDK1P06493 297 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 HTR2AP28223 471 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 POU6F2P78424 691 aaPredicted RBP19.45■□□□□ 0.7
PRDM4-205ENST00000550376 PLAURQ03405 335 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 C1orf94Q6P1W5 598 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 RRM2BQ7LG56 351 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 ZNF675Q8TD23 568 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 UCK1Q9HA47 277 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 DUSP22Q9NRW4 184 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 ERVK-19Q9WJR5 959 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 CTNSO60931 367 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 OR2B3O76000 313 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 NSA2O95478 260 aaKnown RBP19.45■□□□□ 0.7
PRDM4-205ENST00000550376 CH25HO95992 272 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 PTHP01270 115 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 FOLR1P15328 257 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 ACVR2AP27037 513 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 LIPAP38571 399 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 TRAM2Q15035 370 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 SHBQ15464 509 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 MFSD4BQ5TF39 518 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 CASP12Q6UXS9 341 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 RAB2BQ8WUD1 216 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 CCNB1IP1Q9NPC3 277 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 PRDM9Q9NQV7 894 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 IFT52Q9Y366 437 aa19.45■□□□□ 0.7
PRDM4-205ENST00000550376 KPNA4O00629 521 aaPredicted RBP19.44■□□□□ 0.7
PRDM4-205ENST00000550376 APOL3O95236 402 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 HSMCR30P0CW71 290 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 MAP3K8P41279 467 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 GIPRP48546 466 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 ARL4DP49703 201 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 ST3GAL3Q11203 375 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 EXOSC6Q5RKV6 272 aaKnown RBP19.44■□□□□ 0.7
PRDM4-205ENST00000550376 PDZK1Q5T2W1 519 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 SYT6Q5T7P8 510 aaPredicted RBP19.44■□□□□ 0.7
PRDM4-205ENST00000550376 SLX4IPQ5VYV7 408 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 ARHGAP22Q7Z5H3 698 aa19.44■□□□□ 0.7
PRDM4-205ENST00000550376 ZNF321PQ8N8H1 164 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms