RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 MFSD11O43934 449 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SLC25A12O75746 678 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SIX3O95343 332 aaPredicted RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 IPO7O95373 1038 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 BMP10O95393 424 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SERPINA7P05543 415 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 ERVK-10P10266 1014 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 DESP17661 470 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CD53P19397 219 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CA4P22748 312 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 PSMA4P25789 261 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 PON1P27169 355 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 HSPA9P38646 679 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 SSR1P43307 286 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 ZFP36L2P47974 494 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 EMP2P54851 167 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 VSX2P58304 361 aaPredicted RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 RPS3AP61247 264 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 OGDHQ02218 1023 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 PLGLB1Q02325 96 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 NIPAL4Q0D2K0 466 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CSTF3Q12996 717 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 ZBTB17Q13105 803 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 IHHQ14623 411 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 MESDQ14696 234 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 ZNF672Q499Z4 452 aaPredicted RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 KRTCAP3Q53RY4 240 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 TMEM211Q6ICI0 200 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 KDELC1Q6UW63 502 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 LANCL3Q6ZV70 420 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 IL17RELQ6ZVW7 336 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 TUBA1AQ71U36 451 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 NDUFAF7Q7L592 441 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CRLF3Q8IUI8 442 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CHERPQ8IWX8 916 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 ZNF441Q8N8Z8 693 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 TMEM178AQ8NBL3 297 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 POC1AQ8NBT0 407 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 ACVR1CQ8NER5 493 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 OR2AK2Q8NG84 335 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 MPP4Q96JB8 637 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 MTERF1Q99551 399 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 TUBA1CQ9BQE3 449 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SELENOSQ9BQE4 189 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 EXO5Q9H790 373 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SCPEP1Q9HB40 452 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SYTL2Q9HCH5 934 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 SIX2Q9NPC8 291 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 ACSS1Q9NUB1 689 aaPredicted RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.82□□□□□ -1.8
CBX5-203ENST00000547872 ABCF3Q9NUQ8 709 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 RBM22Q9NW64 420 aaKnown RBP eCLIP3.82□□□□□ -1.8
CBX5-203ENST00000547872 TRMT1Q9NXH9 659 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 EURLQ9NYK6 297 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CWC15Q9P013 229 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 TRPC4Q9UBN4 977 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 TEKT2Q9UIF3 430 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 DNPEPQ9ULA0 475 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 FN1P02751 2386 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 CUBNO60494 3623 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 DOCK10Q96BY6 2186 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 A0A0J9YVX5 310 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 TUBAL3A6NHL2 446 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 EEF1E1-BLOC1S5C9J1V9 151 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 PRAC2D3DTV9 90 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 SPINT2O43291 252 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 EEF1E1O43324 174 aaKnown RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CDC123O75794 336 aaPredicted RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 LSM8O95777 96 aaKnown RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 F7P08709 466 aaPredicted RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 CMA1P23946 247 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CHMP24386 653 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CDH5P33151 784 aaPredicted RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 CDH6P55285 790 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CUL4AQ13619 759 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 TSTA3Q13630 321 aaPredicted RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 VEZF1Q14119 521 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 BECN1Q14457 450 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 KRT81Q14533 505 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 PTPRCAPQ14761 206 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 TPD52L1Q16890 204 aaPredicted RBP3.81□□□□□ -1.8
CBX5-203ENST00000547872 ERMARDQ5T6L9 678 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 GPRC6AQ5T6X5 926 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 FRG2Q64ET8 278 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CYP20A1Q6UW02 462 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 WASH2PQ6VEQ5 465 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 SIAH3Q8IW03 269 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 ODF3L1Q8IXM7 274 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 RFLNBQ8N5W9 214 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CCNYQ8ND76 341 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 OR5AR1Q8NGP9 310 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 OR14L1PQ8NHC6 308 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 SPATA22Q8NHS9 363 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 BLOC1S5Q8TDH9 187 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CABS1Q96KC9 395 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 CAPZA3Q96KX2 299 aa3.81□□□□□ -1.8
CBX5-203ENST00000547872 ZNF599Q96NL3 588 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms