RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 HSMCR30P0CW71 290 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 IGHV4-38-2P0DP08 117 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 RALBP11234 206 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 NT5EP21589 574 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 PCMT1P22061 227 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 RFC2P35250 354 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 EPS15P42566 896 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 PLA2G16P53816 162 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SEC61GP60059 68 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 CDR2Q01850 454 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 BST1Q10588 318 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ZP4Q12836 540 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 IL18Q14116 193 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ELAVL3Q14576 367 aaKnown RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF699Q32M78 642 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SPANXN4Q5MJ08 99 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 CTSL3PQ5NE16 218 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SCYL2Q6P3W7 929 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF562Q6V9R5 426 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 CCDC80Q76M96 950 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 NLRP9Q7RTR0 991 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 NET1Q7Z628 596 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ACOT1Q86TX2 421 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 BIVMQ86UB2 503 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 TMEM123Q8N131 208 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 CEP112Q8N8E3 955 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 NFAM1Q8NET5 270 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SPATA4Q8NEY3 305 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 OR4D10Q8NGI6 311 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 OR1L3Q8NH93 324 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SORCS1Q8WY21 1168 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 RPL3LQ92901 407 aaKnown RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 TGM7Q96PF1 710 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 RHOXF2Q9BQY4 288 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 CHRDL1Q9BU40 450 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 PITPNM3Q9BZ71 974 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 TRIM9Q9C026 710 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 POLR3FQ9H1D9 316 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 BICC1Q9H694 974 aaKnown RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SDF2L1Q9HCN8 221 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 HOXC10Q9NYD6 342 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 GPR83Q9NYM4 423 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 GHRLQ9UBU3 117 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 LCMT1Q9UIC8 334 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 CFAP45Q9UL16 551 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 GSTK1Q9Y2Q3 226 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 KLHDC2Q9Y2U9 406 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 MMP24Q9Y5R2 645 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ABCC3O15438 1527 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ATRNO75882 1429 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SAMD9Q5K651 1589 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 UGGT1Q9NYU2 1555 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 SAA2-SAA4A0A096LPE2 208 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 A0A0J9YVX5 310 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 A0A1W2PS18 150 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 BTBD17A6NE02 478 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 FBLL1A6NHQ2 334 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 ERI2A8K979 691 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 TCP11X1B4DZS4 312 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 BMPR1BO00238 502 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 DUX1O43812 170 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 NEMFO60524 1076 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 CAVIN2O95810 425 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 S100A9P06702 114 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 POLR2MP0CAP2 368 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PABPC4LP0CB38 370 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 FAM157CP0CG43 387 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 C4BPBP20851 252 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 LAP3P28838 519 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 CEACAM8P31997 349 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 NF2P35240 595 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 MAGEA8P43361 318 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 OR3A2P47893 321 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 ETV1P50549 477 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 IL9RQ01113 521 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 BNIP1Q12981 228 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 HNRNPDQ14103 355 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 TFDP1Q14186 410 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 SYPL1Q16563 259 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PCK2Q16822 640 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 ADAM5Q6NVV9 412 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 LEKR1Q6ZMV7 388 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 CENPQQ7L2Z9 268 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 GPR142Q7Z601 462 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PIGZQ86VD9 579 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PARGQ86W56 976 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 DND1Q8IYX4 353 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 CLDN19Q8N6F1 224 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 GVQW1Q8N7I0 195 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF321PQ8N8H1 164 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 KCNG3Q8TAE7 436 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 FBXO25Q8TCJ0 367 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 LRRC15Q8TF66 581 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 DNAJA4Q8WW22 397 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 APOBEC4Q8WW27 367 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PIGCQ92535 297 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PEX13Q92968 403 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 SH3YL1Q96HL8 342 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 ST6GAL2Q96JF0 529 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 ANKRD27Q96NW4 1050 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms