RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ADCK2Q7Z695 626 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 C1orf52Q8N6N3 182 aaKnown RBP11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 HUS1BQ8NHY5 278 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 OR1F2PQ96R84 312 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 SPATA5L1Q9BVQ7 753 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 FBXO44Q9H4M3 255 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 THSD1Q9NS62 852 aa11.25□□□□□ -0.61
RBFOX1-208ENST00000547372 CCDC88CQ9P219 2028 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 G3V3Q6 166 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 KLHL18O94889 574 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 GABRA1P14867 456 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 FABP9Q0Z7S8 132 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 CTXN3Q4LDR2 81 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 PGBD2Q6P3X8 592 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 TECPR1Q7Z6L1 1165 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 SVBPQ8N300 66 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 C2orf73Q8N5S3 287 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 OR4C15Q8NGM1 316 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 CSGALNACT1Q8TDX6 532 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 XAGE5Q8WWM1 108 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 C3orf49Q96BT1 292 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 AUNIPQ9H7T9 357 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 SGK2Q9HBY8 427 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 ASF1BQ9NVP2 202 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 ASIC5Q9NY37 505 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 DHRS7Q9Y394 339 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 PLSCR5A0PG75 271 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 TUBAL3A6NHL2 446 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 IFNA4P05014 189 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 OSMP13725 252 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 HSD3B1P14060 373 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 DDX6P26196 483 aaKnown RBP eCLIP11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 HOXC13P31276 330 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 RORAP35398 523 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 GJA5P36382 358 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 RAB5BP61020 215 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 MLLT1Q03111 559 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 POU4F2Q12837 409 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 RAB41Q5JT25 222 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 FRG2Q64ET8 278 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 H3F3CQ6NXT2 135 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 TAPT1Q6NXT6 567 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 ARL9Q6T311 187 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 SBSNQ6UWP8 590 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 GPRC5AQ8NFJ5 357 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 OR5M3Q8NGP4 307 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 STK35Q8TDR2 534 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 ACOT12Q8WYK0 555 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 MS4A4EQ96PG1 132 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 FRG2BQ96QU4 278 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 ZFYVE1Q9HBF4 777 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 UFSP2Q9NUQ7 469 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 NLE1Q9NVX2 485 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 PCDHB11Q9Y5F2 797 aa11.24□□□□□ -0.61
RBFOX1-208ENST00000547372 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 PRAMEF2O60811 474 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 SNAPINO95295 136 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 PPP3CBP16298 524 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 MAP4K2Q12851 820 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 CNTN1Q12860 1018 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 DEFB115Q30KQ5 88 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 SYT14P1Q58G82 188 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 AFMIDQ63HM1 303 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 USP53Q70EK8 1073 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 LRRC28Q86X40 367 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 OR5M1Q8NGP8 315 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 PPTC7Q8NI37 304 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 BBS10Q8TAM1 723 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 MEGF10Q96KG7 1140 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 SLC35A5Q9BS91 424 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 FNDC11Q9BVV2 318 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 OR51M1Q9H341 326 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 ING1Q9UK53 422 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 ANGPT4Q9Y264 503 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 PMS2P1A4D2B8 440 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 ICOSLGO75144 302 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 OR12D1P0DN82 309 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 PTHLHP12272 177 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 SNRPBP14678 240 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 EDNRBP24530 442 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 BUD31P41223 144 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 PGFP49763 221 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 CDK6Q00534 326 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 STX4Q12846 297 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 GAB1Q13480 694 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 EIF2S3LQ2VIR3 472 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 SLC36A2Q495M3 483 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
RBFOX1-208ENST00000547372 RBM45Q8IUH3 476 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms