RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 OR2M3Q8NG83 312 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 OR6Y1Q8NGX8 325 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 DUSP19Q8WTR2 217 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 GFM2Q969S9 779 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 RMND5BQ96G75 393 aaPredicted RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 FCRL1Q96LA6 429 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 PPP3R2Q96LZ3 170 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 TSSK3Q96PN8 268 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 PIGQQ9BRB3 760 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 GPATCH1Q9BRR8 931 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 RBM24Q9BX46 236 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 MED11Q9P086 117 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 CLCF1Q9UBD9 225 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 PACSIN3Q9UKS6 424 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 SPENQ96T58 3664 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 INTS1Q8N201 2190 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 CENPEQ02224 2701 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 CASKO14936 926 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 LSM1O15116 133 aaKnown RBP8.47□□□□□ -1.05
YBX3-218ENST00000546298 EMC8O43402 210 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 TNFRSF21O75509 655 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 SOX30O94993 753 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 NKX2-2O95096 273 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 HSPA4LO95757 839 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 ALOX5P09917 674 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 SDC1P18827 310 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 TCEA1P23193 301 aaKnown RBP8.47□□□□□ -1.05
YBX3-218ENST00000546298 ALDH3A1P30838 453 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 HPCAL1P37235 193 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 PRIM2P49643 509 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 IST1P53990 364 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 PRKAG1P54619 331 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 RIPPLY3P57055 190 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 PRR5P85299 388 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 FOXF2Q12947 444 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 PDE7AQ13946 482 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 FGFBP1Q14512 234 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 GALNTL6Q49A17 601 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 RFTN2Q52LD8 501 aaPredicted RBP8.47□□□□□ -1.05
YBX3-218ENST00000546298 ANKRD26P1Q6NSI1 321 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 EMBQ6PCB8 327 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 SZRD1Q7Z422 152 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 MARCH3Q86UD3 253 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 UBQLNLQ8IYU4 475 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 CHDHQ8NE62 594 aaPredicted RBP8.47□□□□□ -1.05
YBX3-218ENST00000546298 NUP43Q8NFH3 380 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 OR2T11Q8NH01 316 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 OR2W6PQ8NHA6 318 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 TWIST2Q8WVJ9 160 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 SLC9A6Q92581 669 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 C1GALT1C1Q96EU7 318 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 MS4A4EQ96PG1 132 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 FAM111AQ96PZ2 611 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 PRPF18Q99633 342 aaKnown RBP8.47□□□□□ -1.05
YBX3-218ENST00000546298 FOXC2Q99958 501 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 YIPF4Q9BSR8 244 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 TUBB1Q9H4B7 451 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 ANKZF1Q9H8Y5 726 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 EQTNQ9NQ60 294 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 NTMQ9P121 344 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 NDRG3Q9UGV2 375 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 LGALS13Q9UHV8 139 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 ZNF175Q9Y473 711 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 PTGDR2Q9Y5Y4 395 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
YBX3-218ENST00000546298 NINQ8N4C6 2090 aa8.46□□□□□ -1.05
YBX3-218ENST00000546298 A0A087WZY1 265 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 IGLV3-32A0A0A0MS00 114 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 A0A1W2PNV4 684 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 GXYLT2A0PJZ3 443 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 OR2M5A3KFT3 312 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 SLC22A20A6NK97 555 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 A8MXE2 369 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 ALG1L2C9J202 215 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 MSTNO14793 375 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 PIP5K1BO14986 540 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 NDUFB5O43674 189 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 LYPLA1O75608 230 aaPredicted RBP8.46□□□□□ -1.06
YBX3-218ENST00000546298 ANGPTL1O95841 491 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 NGFRP08138 427 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 FCGR2AP12318 317 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 BCKDHAP12694 445 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 HPGDP15428 266 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 FRKP42685 505 aaPredicted RBP8.46□□□□□ -1.06
YBX3-218ENST00000546298 SERPINB4P48594 390 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 PCYT1AP49585 367 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 B3GALT5-AS1P59052 145 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 OCRLQ01968 901 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 MLC1Q15049 377 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 SGCBQ16585 318 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.46□□□□□ -1.06
YBX3-218ENST00000546298 UGT3A2Q3SY77 523 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 ATP6AP1LQ52LC2 224 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 MFSD12Q6NUT3 480 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 CAMKMTQ7Z624 323 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 LUZP2Q86TE4 346 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 CDC20BQ86Y33 519 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 MISPQ8IVT2 679 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 GCNT2Q8N0V5 402 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms