RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LEPRP48357 1165 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 EEFSECP57772 596 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 IDO2Q6ZQW0 420 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LANCL3Q6ZV70 420 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF627Q7L945 461 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ABHD12BQ7Z5M8 362 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 P2RY8Q86VZ1 359 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SFTPA1Q8IWL2 248 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 OR51A7Q8NH64 312 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PPP1R35Q8TAP8 253 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PCNPQ8WW12 178 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 IL4I1Q96RQ9 567 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 FUNDC2Q9BWH2 189 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 C14orf119Q9NWQ9 140 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 NXT1Q9UKK6 140 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 NUP50Q9UKX7 468 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF701M0R085 212 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SOCS2O14508 198 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 KLK10O43240 276 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 BCAS1O75363 584 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SCGB2A1O75556 95 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 RAB36O95755 333 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 OR12D1P0DN82 309 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 HSD3B1P14060 373 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 EDNRAP25101 427 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 HSD3B2P26439 372 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 THBS2P35442 1172 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 FASLGP48023 281 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 RNF144AP50876 292 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 GPR143P51810 404 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 DCDP81605 110 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 CEACAM7Q14002 265 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 MFSD13AQ14CX5 517 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SPCS2Q15005 226 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PRSS36Q5K4E3 855 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 OR4C11Q6IEV9 310 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TSSK4Q6SA08 328 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM107Q6UX40 140 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 DPPA4Q7L190 304 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 KIAA0907Q7Z7F0 614 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ARMC10Q8N2F6 343 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 CREB3L4Q8TEY5 395 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ELSPBP1Q96BH3 223 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZDHHC5Q9C0B5 715 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LHPPQ9H008 270 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PDFQ9HBH1 243 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ARNT2Q9HBZ2 717 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PRSS16Q9NQE7 514 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 STARD5Q9NSY2 213 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 OXSMQ9NWU1 459 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZIM2Q9NZV7 527 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 DNAJB11Q9UBS4 358 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 STOML2Q9UJZ1 356 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ADAM18Q9Y3Q7 739 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 RPL36Q9Y3U8 105 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SULT2B1O00204 365 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 SLC35E2BP0CK96 405 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 G6PDP11413 515 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 CDK10Q15131 360 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 TRAPPC6BQ86SZ2 158 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF683Q8IZ20 524 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 GCDHQ92947 438 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 OR5B2Q96R09 309 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM168Q9H0V1 697 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 CUTCQ9NTM9 273 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 MUTYHQ9UIF7 546 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 RIMS3Q9UJD0 308 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 R4GN57 208 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 SPAG17Q6Q759 2223 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 RTTNQ86VV8 2226 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 MPPED1O15442 326 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 FCER2P06734 321 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 PDHA2P29803 388 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 ACSL1P33121 698 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 SMSP52788 366 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 EPHA5P54756 1037 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 IFITM2Q01629 132 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 AKIRIN2Q53H80 203 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 PRAMEF8Q5VWM4 474 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 PRAMEF7Q5VXH5 474 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 AFMIDQ63HM1 303 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 METTL2BQ6P1Q9 378 aaKnown RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 C3orf33Q6P1S2 294 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 OR5T2Q8NGG2 359 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 OR52E1Q8NGJ3 308 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 AMBNQ9NP70 447 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 WASH6PQ9NQA3 447 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 SARDHQ9UL12 918 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 TRBV11-1A0A0K0K1C0 115 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM233B4DJY2 109 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 SGK494L7N484 410 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 SRPX2O60687 465 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 PLATP00750 562 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 MTHFD2P13995 350 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 UQCRC2P22695 453 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms