RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZNF658Q5TYW1 1059 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-224ENST00000545688 KLHDC8AQ8IYD2 350 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 NHLRC2Q8NBF2 726 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 AFAP1L1Q8TED9 768 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 FAM104AQ969W3 186 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 FAM162AQ96A26 154 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 ULK4Q96C45 1275 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 BIRC7Q96CA5 298 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 ACPTQ9BZG2 426 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 ERVK-19Q9WJR5 959 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 MTCH2Q9Y6C9 303 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 DMXL1Q9Y485 3027 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 ACACBO00763 2458 aa2.99□□□□□ -1.93
SNHG1-224ENST00000545688 TECTAO75443 2155 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 BAHCC1Q9P281 2608 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 CHD6Q8TD26 2715 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 PINLYPA6NC86 204 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 NUDT14O95848 222 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 BDNFP23560 247 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 TRPC1P48995 793 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 ARHGDIBP52566 201 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 SLC7A2P52569 658 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 GNB2P62879 340 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 SCN1BQ07699 218 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 HEPACAMQ14CZ8 416 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 MPP7Q5T2T1 576 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 MFSD14CQ5VZR4 134 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 SLC22A10Q63ZE4 541 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 RHBDD2Q6NTF9 364 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 ZCCHC12Q6PEW1 402 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 ENTHD1Q8IYW4 607 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 THEM5Q8N1Q8 247 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 GGHQ92820 318 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 ELSPBP1Q96BH3 223 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 C16orf74Q96GX8 76 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 C12orf42Q96LP6 360 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 TMOD2Q9NZR1 351 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 CA5BQ9Y2D0 317 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 ROBO3Q96MS0 1386 aa2.98□□□□□ -1.93
SNHG1-224ENST00000545688 FASNP49327 2511 aaKnown RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 A0A1B0GUL6 1792 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 LOC285556D6RIA3 1793 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 EP300Q09472 2414 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 RSPH10B2B2RC85 870 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 C19orf81C9J6K1 198 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 STBD1O95210 358 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 CPNE6O95741 557 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 HSPB1P04792 205 aaKnown RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 RSPH10BP0C881 870 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 PVRP15151 417 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 IFNAR1P17181 557 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 CASTP20810 708 aaKnown RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 IDSP22304 550 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 FRKP42685 505 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 RIPPLY3P57055 190 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 HSPA14Q0VDF9 509 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 PSG7Q13046 419 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 RABL6Q3YEC7 729 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 MS4A13Q5J8X5 152 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 BEND3Q5T5X7 828 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 PRSS48Q7RTY5 328 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 SIX6OS1Q8N1H7 587 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 C14orf178Q8N769 122 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 CDKN2AIPNLQ96HQ2 116 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 ZNF184Q99676 751 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-224ENST00000545688 TUFT1Q9NNX1 390 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 MIEF1Q9NQG6 463 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 DNAJC11Q9NVH1 559 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 NRBP1Q9UHY1 535 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 FRMPD3Q5JV73 1810 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 MYH3P11055 1940 aa2.97□□□□□ -1.93
SNHG1-224ENST00000545688 MROH5Q6ZUA9 1318 aa2.96□□□□□ -1.93
SNHG1-224ENST00000545688 MAPK8IP3Q9UPT6 1336 aa2.96□□□□□ -1.93
SNHG1-224ENST00000545688 ASPMQ8IZT6 3477 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 CTAGE5O15320 804 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 PSMD3O43242 534 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 NUDT21O43809 227 aaKnown RBP2.96□□□□□ -1.94
SNHG1-224ENST00000545688 TSPAN2O60636 221 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 ASNSP08243 561 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 NR2C1P13056 603 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 XCR1P46094 333 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 TNFSF10P50591 281 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 TKTL1P51854 596 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 PTK6Q13882 451 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 SERTAD2Q14140 314 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 ZNF658BQ4V348 819 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-224ENST00000545688 LRRC38Q5VT99 294 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 TAF3Q5VWG9 929 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 SHQ1Q6PI26 577 aaKnown RBP2.96□□□□□ -1.94
SNHG1-224ENST00000545688 PET117Q6UWS5 81 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 ASPGQ86U10 573 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 TGIF2LYQ8IUE0 185 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 GPR65Q8IYL9 337 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 CCDC89Q8N998 374 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 MR1Q95460 341 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 SERINC2Q96SA4 455 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 C19orf43Q9BQ61 176 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 NMUR2Q9GZQ4 415 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 ZDHHC6Q9H6R6 413 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 TMEM161AQ9NX61 479 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms