RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TRIM8Q9BZR9 551 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 RNF32Q9H0A6 362 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 CXorf21Q9HAI6 301 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 HHATLQ9HCP6 504 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 A4GALTQ9NPC4 353 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 CHST11Q9NPF2 352 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 ADAP2Q9NPF8 381 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 PRTFDC1Q9NRG1 225 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 LANCL2Q9NS86 450 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 SIRT3Q9NTG7 399 aaPredicted RBP6.09□□□□□ -1.43
CDCA3-209ENST00000544610 CMTM6Q9NX76 183 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 PLA2G3Q9NZ20 509 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 ADA2Q9NZK5 511 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 CALML5Q9NZT1 146 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 FBXW2Q9UKT8 454 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 ERVK-11Q9UQG0 969 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 POMPQ9Y244 141 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 RRP15Q9Y3B9 282 aaKnown RBP6.09□□□□□ -1.43
CDCA3-209ENST00000544610 CLDN16Q9Y5I7 305 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 SNX13Q9Y5W8 968 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 DCHS2Q6V1P9 2916 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 SCN3AQ9NY46 2000 aa6.09□□□□□ -1.43
CDCA3-209ENST00000544610 RP1L1Q8IWN7 2480 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 POLEQ07864 2286 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 LOC102723996A0A087X1L8 192 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 A0A0G2JN53 185 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 RNF103-CHMP3A0A140T963 221 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 ELOVL7A1L3X0 281 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 TMEM247A6NEH6 219 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CCL21O00585 134 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FGF17O60258 216 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 MGRN1O60291 552 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PRAMEF2O60811 474 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 ERAL1O75616 437 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PDE9AO76083 593 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 RASAL1O95294 804 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 WDPCPO95876 746 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 F10P00742 488 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CRYABP02511 175 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 GPIP06744 558 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 C8BP07358 591 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CELA2AP08217 269 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PCGF2P35227 344 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 MAP3K8P41279 467 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CCT3P49368 545 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PRIM2P49643 509 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 GSK3BP49841 420 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 EMP2P54851 167 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 AP2B1P63010 937 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 RHAGQ02094 409 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 LIPEQ05469 1076 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 TP53BP2Q13625 1128 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CEACAM7Q14002 265 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 GK3PQ14409 553 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PCOLCEQ15113 449 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 VMACQ2NL98 169 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PRICKLE4Q2TBC4 344 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 ZNF628Q5EBL2 1059 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 C1orf146Q5VVC0 180 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FAM219BQ5XKK7 198 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 TMEM205Q6UW68 189 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PRSS41Q7RTY9 318 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 ZC3H7AQ8IWR0 971 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 VWA5B2Q8N398 1253 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 LILRB2Q8N423 598 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CDRT4Q8N9R6 151 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 MORN4Q8NDC4 146 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FAM13CQ8NE31 585 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 OR14A16Q8NHC5 309 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CDC26Q8NHZ8 85 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FBXO27Q8NI29 283 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CIDECQ96AQ7 238 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 EXOSC8Q96B26 276 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FAM120BQ96EK7 910 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FBXL20Q96IG2 436 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 DGAT2Q96PD7 388 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 KCTD14Q9BQ13 255 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 INPP5KQ9BT40 448 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 BTBD2Q9BX70 525 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 ACTRT3Q9BYD9 372 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 ZNF700Q9H0M5 742 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 MAGIXQ9H6Y5 334 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 DCLRE1BQ9H816 532 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 BCL2L10Q9HD36 194 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 SLAMF8Q9P0V8 285 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 TRPC4Q9UBN4 977 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 SEC14L3Q9UDX4 400 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 PRODH2Q9UF12 536 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 C19orf25Q9UFG5 118 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 FAF1Q9UNN5 650 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CACNA1DQ01668 2161 aa6.08□□□□□ -1.44
CDCA3-209ENST00000544610 CPAMD8Q8IZJ3 1885 aa6.07□□□□□ -1.44
CDCA3-209ENST00000544610 TCRBV3S1A0A5B6 114 aa6.07□□□□□ -1.44
CDCA3-209ENST00000544610 OR5H15A6NDH6 313 aa6.07□□□□□ -1.44
CDCA3-209ENST00000544610 C9JVG2 144 aa6.07□□□□□ -1.44
CDCA3-209ENST00000544610 H0YHG0 523 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms