RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZMAT3Q9HA38 289 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 EIF2B3Q9NR50 452 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 INTS10Q9NVR2 710 aaKnown RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 ANO10Q9NW15 660 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 TEX10Q9NXF1 929 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 WWOXQ9NZC7 414 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 FAM30AQ9NZY2 134 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 MARCH4Q9P2E8 410 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 NENFQ9UMX5 172 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 DAPP1Q9UN19 280 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 SH2B3Q9UQQ2 575 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 GPR52Q9Y2T5 361 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 HRNRQ86YZ3 2850 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 AKAP6Q13023 2319 aa3.65□□□□□ -1.83
SNHG1-220ENST00000544550 MAP1AP78559 2803 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-220ENST00000544550 RAI1Q7Z5J4 1906 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 MEGF8Q7Z7M0 2845 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA6L9A6NEM1 432 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 B5MCH6 92 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PHGDHO43175 533 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ERI3O43414 337 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 NDUFS7O75251 213 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 LRATO95237 230 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ETHE1O95571 254 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 TGM6O95932 706 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 IGKV3-11P04433 115 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CD1AP06126 327 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SBK3P0C264 359 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CCDC166P0CW27 439 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RAP2AP10114 183 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PEPDP12955 493 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF708P17019 499 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PSMB1P20618 241 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PEX2P28328 305 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SRD5A2P31213 254 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RPL22P35268 128 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 FDFT1P37268 417 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RPS19P39019 145 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CASP3P42574 277 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 STT3AP46977 705 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RGS4P49798 205 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 HNRNPFP52597 415 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 AP1S2P56377 157 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CLDN18P56856 261 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 FBXW4P57775 412 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RPS13P62277 151 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SIRPAP78324 504 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 REEP5Q00765 189 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CTBP1Q13363 440 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RUNX2Q13950 521 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 EBPQ15125 230 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RBBP5Q15291 538 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 STX1AQ16623 288 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 FNDC7Q5VTL7 733 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 UGT3A1Q6NUS8 523 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SLC30A6Q6NXT4 461 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 UGT2A3Q6UWM9 527 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SBSNQ6UWP8 590 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ANGPTL8Q6UXH0 198 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 STAC2Q6ZMT1 411 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 DEF8Q6ZN54 512 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 USP43Q70EL4 1123 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 KIAA1328Q86T90 577 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 EXOC3L1Q86VI1 746 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 KLHDC8AQ8IYD2 350 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 TEX29Q8N6K0 151 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF525Q8N782 197 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 FAM71DQ8N9W8 422 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF540Q8NDQ6 660 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 MCUQ8NE86 351 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SRFBP1Q8NEF9 429 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 OR2L5Q8NG80 312 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 OR6K3Q8NGY3 331 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 LILRB1Q8NHL6 650 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RAB3IL1Q8TBN0 382 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 HSD17B8Q92506 261 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ARL8AQ96BM9 186 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PYCR2Q96C36 320 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 APIPQ96GX9 242 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RADILQ96JH8 1075 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF778Q96MU6 729 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SFXN2Q96NB2 322 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 LRRC37BQ96QE4 947 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PIMREGQ9BSJ6 248 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 MRI1Q9BV20 369 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF747Q9BV97 191 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 OSBPL11Q9BXB4 747 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CACNG6Q9BXT2 260 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 HDHD5Q9BXW7 423 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 TRIM54Q9BYV2 358 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 TRIM2Q9C040 744 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 REXO4Q9GZR2 422 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 WWTR1Q9GZV5 400 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 NAT10Q9H0A0 1025 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 STMN4Q9H169 189 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 MRPL46Q9H2W6 279 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 METTL7AQ9H8H3 244 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 RNF122Q9H9V4 155 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PELI2Q9HAT8 420 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms