RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NPIPA5E9PKD4 350 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GTPBP1O00178 669 aaKnown RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 HMGN4O00479 90 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 FBP2O00757 339 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NDUFB5O43674 189 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GMFGO60234 142 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ICOSLGO75144 302 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 TRAPPC6AO75865 159 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CYP7B1O75881 506 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 UNC5CO95185 931 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 SNX4O95219 450 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 OXSR1O95747 527 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 ANGPTL1O95841 491 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NPPAP01160 153 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 IGKV1D-16P01601 117 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 BCHEP06276 602 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NPIPA8P0DM63 369 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ESRRAP11474 423 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 ZNF24P17028 368 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GDF1P27539 372 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 EVI2BP34910 448 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 DCTP40126 519 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CPA2P48052 419 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 MAN2A2P49641 1150 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NUDT2P50583 147 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 RNF144AP50876 292 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 CRISP3P54108 245 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 MTPNP58546 118 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 PPIAP62937 165 aaKnown RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 FADDQ13158 208 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 SNTA1Q13424 505 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ELOAQ14241 798 aaKnown RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 RGNQ15493 299 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 INPP5JQ15735 1006 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 SYPL1Q16563 259 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CYP51A1Q16850 503 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.79□□□□□ -1.48
LTBR-212ENST00000543542 GRAMD1BQ3KR37 738 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ARHGAP11BQ3KRB8 267 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 PRR30Q53SZ7 412 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 RUNDC3AQ59EK9 446 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 COQ5Q5HYK3 327 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 LRIF1Q5T3J3 769 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GCNT6Q5T4J0 391 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 MARCH3Q86UD3 253 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 RETREG3Q86VR2 466 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 SLC22A16Q86VW1 577 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ZNF227Q86WZ6 799 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 TREML1Q86YW5 311 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 DPP10Q8N608 796 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 TMCO5AQ8N6Q1 288 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 Q8NA96 180 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GATSQ8NAP1 163 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 POGLUT1Q8NBL1 392 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 OR4K17Q8NGC6 315 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 OR1J4Q8NGS1 313 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 PHOSPHO1Q8TCT1 267 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 MIPOL1Q8TD10 442 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GRHL3Q8TE85 626 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 LRRC58Q96CX6 371 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 SNRNP40Q96DI7 357 aaKnown RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 ANKRD27Q96NW4 1050 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 SDF2Q99470 211 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CGREF1Q99674 301 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ECSITQ9BQ95 431 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ANGPTL4Q9BY76 406 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 TRIM4Q9C037 500 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 MYLK2Q9H1R3 596 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 TSPAN10Q9H1Z9 355 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 SERHL2Q9H4I8 314 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 PIF1Q9H611 641 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 LDAHQ9H6V9 325 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 GALNT9Q9HCQ5 603 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 SLC52A3Q9NQ40 469 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 UBQLN4Q9NRR5 601 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 DEPPQ9NTK1 212 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 FBXO34Q9NWN3 711 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 TUBA8Q9NY65 449 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 SLC25A37Q9NYZ2 338 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CALML5Q9NZT1 146 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 DKKL1Q9UK85 242 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CNOT11Q9UKZ1 510 aaKnown RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 MKLN1Q9UL63 735 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 NPIPA1Q9UND3 350 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 ABCG2Q9UNQ0 655 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 LIPT1Q9Y234 373 aa5.79□□□□□ -1.48
LTBR-212ENST00000543542 CHCHD2Q9Y6H1 151 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 NUP214P35658 2090 aaPredicted RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 TPRP12270 2363 aaKnown RBP5.79□□□□□ -1.48
LTBR-212ENST00000543542 BOD1L1Q8NFC6 3051 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 KMT2BQ9UMN6 2715 aaPredicted RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 C15orf38-AP3S2A0A0A6YYH1 394 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 A0A0G2JMM0 328 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 A0A1W2PPB8 328 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 A0A1W2PRS3 328 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 PINLYPA6NC86 204 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ANKRD33BA6NCL7 494 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 KIR3DP1A8MWS1 328 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 SUV39H1O43463 412 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 FCMRO60667 390 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms