RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 IRF2BPLQ9H1B7 796 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 NKX2-4Q9H2Z4 354 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 TMPRSS11EQ9UL52 423 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 NDRG4Q9ULP0 352 aaKnown RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 AK6Q9Y3D8 172 aaKnown RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 C5AR1P21730 350 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 MMP11P24347 488 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 ELAVL4P26378 380 aaKnown RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 BTBD16Q32M84 506 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 ACSM5Q6NUN0 579 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 SLC46A3Q7Z3Q1 461 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 MINDY2Q8NBR6 621 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 OR8S1Q8NH09 359 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 FUZQ9BT04 418 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 THSD1Q9NS62 852 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 TMEM184CQ9NVA4 438 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 NFKBIL1Q9UBC1 381 aaPredicted RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 UBE2QL1A1L167 161 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 MAGEB4O15481 346 aaPredicted RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 SYT6Q5T7P8 510 aaPredicted RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 TMEM64Q6YI46 380 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 TMC8Q8IU68 726 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 OR5T3Q8NGG3 340 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 CNDP2Q96KP4 475 aaKnown RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 TOX2Q96NM4 488 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 B3GNT4Q9C0J1 378 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 DUSP21Q9H596 190 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 FGF22Q9HCT0 170 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 OR2A25A4D2G3 310 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 TMEM150CB9EJG8 249 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 SOCS6O14544 535 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 HOXB3P14651 431 aaPredicted RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 RPS19P39019 145 aaKnown RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 MLLT3P42568 568 aaPredicted RBP15.13■□□□□ 0.01
VARS2-212ENST00000542001 CSNK1G2P78368 415 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 ADAM15Q13444 863 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 INAVAQ3KP66 663 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 OTPQ5XKR4 325 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 IKBIPQ70UQ0 350 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 GALNTL5Q7Z4T8 443 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 TSTD1Q8NFU3 115 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 SLC6A14Q9UN76 642 aa15.13■□□□□ 0.01
VARS2-212ENST00000542001 BCL6P41182 706 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 MAT1AQ00266 395 aaKnown RBP15.12■□□□□ 0.01
VARS2-212ENST00000542001 GAS6Q14393 721 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 NKAIN4Q8IVV8 208 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 OR9A4Q8NGU2 314 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 ACTRT3Q9BYD9 372 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 ZNF224Q9NZL3 707 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 LIPT1Q9Y234 373 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 TRBV2A0A0J9YWF9 115 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 A0A1W2PQ72 361 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 LRRTM2O43300 516 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 OPN1LWP04000 364 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 FUT1P19526 365 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 HOXD12P35452 270 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 OR5M10Q6IEU7 315 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 TMED4Q7Z7H5 227 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 PDXPQ96GD0 296 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 AMDHD1Q96NU7 426 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 ZNF559Q9BR84 538 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 SLC25A18Q9H1K4 315 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 SFXN1Q9H9B4 322 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 SIAEQ9HAT2 523 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 EXOSC1Q9Y3B2 195 aaKnown RBP15.12■□□□□ 0.01
VARS2-212ENST00000542001 SH3D21A4FU49 640 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 LINC01553A4QN01 128 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 KIAA0355O15063 1070 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 CDC40O60508 579 aaKnown RBP eCLIP15.12■□□□□ 0.01
VARS2-212ENST00000542001 CD3GP09693 182 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 CXCR1P25024 350 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 STAT5AP42229 794 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 WNT3P56703 355 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 HES5Q5TA89 166 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 BCL2L15Q5TBC7 163 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 ZNF627Q7L945 461 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 LYSMD1Q96S90 227 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 TBX21Q9UL17 535 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 GPR34Q9UPC5 381 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 A0A1W2PRQ8 180 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 CPNE6O95741 557 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 YES1P07947 543 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 JUNDP17535 347 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 ATP5A1P25705 553 aaKnown RBP15.12■□□□□ 0.01
VARS2-212ENST00000542001 PSMD4P55036 377 aaKnown RBP15.12■□□□□ 0.01
VARS2-212ENST00000542001 TCTN3Q6NUS6 607 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 Q6ZSR6 202 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 OR13C2Q8NGS9 318 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 SEC61A2Q9H9S3 476 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 ATP13A2Q9NQ11 1180 aa15.12■□□□□ 0.01
VARS2-212ENST00000542001 AQP9O43315 295 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 PIP5K1CO60331 668 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 SLC2A10O95528 541 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 ATXN7L3Q14CW9 347 aaPredicted RBP15.11■□□□□ 0.01
VARS2-212ENST00000542001 TMEM35AQ53FP2 167 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 SLC25A25Q6KCM7 469 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 TMEM255BQ8WV15 326 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 EFHD2Q96C19 240 aaPredicted RBP15.11■□□□□ 0.01
VARS2-212ENST00000542001 ALG8Q9BVK2 526 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 PRTFDC1Q9NRG1 225 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms