RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MTNR1BP49286 362 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 RNF144AP50876 292 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 TAS2R43P59537 309 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 DCDC1P59894 354 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ZNF91Q05481 1191 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 SLAMF1Q13291 335 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 CHRNA6Q15825 494 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 BTBD16Q32M84 506 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 MINDY4Q4G0A6 757 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 ATXN7L2Q5T6C5 722 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 SLC22A10Q63ZE4 541 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ZNF770Q6IQ21 691 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 DBX2Q6ZNG2 339 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 FAM83HQ6ZRV2 1179 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 FGD2Q7Z6J4 655 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 AMIGO1Q86WK6 493 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 SLC22A15Q8IZD6 547 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 CADM2Q8N3J6 435 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 OR52N1Q8NH53 320 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ZNF431Q8TF32 576 aaPredicted RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 ASB13Q8WXK3 278 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 OR8D1Q8WZ84 308 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 OR5P2Q8WZ92 322 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ECHDC3Q96DC8 303 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 OMA1Q96E52 524 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 C1GALT1C1Q96EU7 318 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 ZNF354BQ96LW1 612 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 GPR137Q96N19 417 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 NEDD4LQ96PU5 975 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 CITED4Q96RK1 184 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 MYOCQ99972 504 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 NIPSNAP1Q9BPW8 284 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 RHNO1Q9BSD3 238 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 TM6SF2Q9BZW4 377 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 DPAGT1Q9H3H5 408 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 PRM3Q9NNZ6 103 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 AMBNQ9NP70 447 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 INPP5EQ9NRR6 644 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 SEMA3GQ9NS98 782 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 IL20Q9NYY1 176 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 GLTPQ9NZD2 209 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 IL36AQ9UHA7 158 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 SLC22A14Q9Y267 594 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 CSNK1G3Q9Y6M4 447 aa9.77□□□□□ -0.85
CHFR-219ENST00000541341 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
CHFR-219ENST00000541341 A0A1B0GTQ1 180 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 LOC105371267A0A1B0GV96 52 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 C12orf71A8MTZ7 269 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 BTN3A3O00478 584 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 CASC3O15234 703 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 TLX3O43711 291 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 OR10H3O60404 316 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SDC3O75056 442 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 PSIP1O75475 530 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 TSPAN9O75954 239 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SLC22A5O76082 557 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 TPPPO94811 219 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 DKK1O94907 266 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SLCO2B1O94956 709 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 LDOC1O95751 146 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 WDPCPO95876 746 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 PRNPP04156 253 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 IFNA16P05015 189 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 HMGN1P05114 100 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 TPOP07202 933 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 MMP12P39900 470 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 EIF2S3P41091 472 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 PPP2CBP62714 309 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 PPP2CAP67775 309 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 EEF1A2Q05639 463 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 RGS1Q08116 209 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 IL18Q14116 193 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SHBQ15464 509 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 CST6Q15828 149 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 GRK1Q15835 563 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SYTL3Q4VX76 610 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 PYHIN1Q6K0P9 492 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 ZNF551Q7Z340 670 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 BPHLQ86WA6 291 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 RASGRP3Q8IV61 690 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 LAS2Q8IYD9 372 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 KRT78Q8N1N4 520 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 KLHL36Q8N4N3 616 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 LSMEM1Q8N8F7 131 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SLC37A3Q8NCC5 494 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 CHST14Q8NCH0 376 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 OR8H1Q8NGG4 311 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 OR14C36Q8NHC7 312 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 NFKBIDQ8NI38 313 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 TEX47Q8TBZ9 253 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 HGDQ93099 445 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 GTPBP3Q969Y2 492 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 TMEM159Q96B96 161 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 MOAP1Q96BY2 351 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 ERMAPQ96PL5 475 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 MRI1Q9BV20 369 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms