RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.1	□□□□□ -1.75
YBX3-210	ENST00000540975	CFLAR	O15519	480 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	NME2P1	O60361	137 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	NMT2	O60551	498 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	ZNF254	O75437	659 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	ERLIN1	O75477	346 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	S100A5	P33763	92 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	PITPNB	P48739	271 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	POU3F4	P49335	361 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	CNN1	P51911	297 aa	Known RBP	4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	KRTAP10-8	P60410	259 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	BOLA3	Q53S33	107 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	CAVIN4	Q5BKX8	364 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	CCDC170	Q8IYT3	715 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	C10orf53	Q8N6V4	93 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	SPERT	Q8NA61	448 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	DLX4	Q92988	240 aa	Predicted RBP	4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	LRRC45	Q96CN5	670 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	DNAJA3	Q96EY1	480 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	NAP1L3	Q99457	506 aa	Predicted RBP	4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	APOO	Q9BUR5	198 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	VCPKMT	Q9H867	229 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	ZNF702P	Q9H963	129 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	STARD5	Q9NSY2	213 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	EVC2	Q86UK5	1308 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	NCOA1	Q15788	1441 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	FMN1	Q68DA7	1419 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	LRRC9	Q6ZRR7	1453 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	ARHGAP35	Q9NRY4	1499 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	EFCAB5	A4FU69	1503 aa		4.09	□□□□□ -1.75
YBX3-210	ENST00000540975	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	POLR3G	O15318	223 aa	Predicted RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	SPAG9	O60271	1321 aa	Known RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	SNX4	O95219	450 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	RPSA	P08865	295 aa	Known RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	AREG	P15514	252 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	ZNF18	P17022	549 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	RDX	P35241	583 aa	Known RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	BNIP1	Q12981	228 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	RCN1	Q15293	331 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	CARMIL1	Q5VZK9	1371 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	KDELC1	Q6UW63	502 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	CWC27	Q6UX04	472 aa	Known RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	IQCA1	Q86XH1	822 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	OR4F17	Q8NGA8	305 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	DEFB118	Q96PH6	123 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	OR4F4	Q96R69	305 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	VCX3B	Q9H321	246 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	HPS4	Q9NQG7	708 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	PURG	Q9UJV8	347 aa	Known RBP	4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	DUSP12	Q9UNI6	340 aa		4.08	□□□□□ -1.76
YBX3-210	ENST00000540975	TIAM1	Q13009	1591 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CUX1	P39880	1505 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	ZMYM4	Q5VZL5	1548 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	UHRF1BP1L	A0JNW5	1464 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	FYCO1	Q9BQS8	1478 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CASKIN1	Q8WXD9	1431 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	LRPPRC	P42704	1394 aa	Known RBP	4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CCDC69	A6NI79	296 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	SERF1A	O75920	110 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	GUCA1C	O95843	209 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	IGSF6	O95976	241 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	HSPB1	P04792	205 aa	Known RBP	4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	H2AFZ	P0C0S5	128 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CPN1	P15169	458 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	HSD17B2	P37059	387 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	SGSH	P51688	502 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CCNH	P51946	323 aa	Predicted RBP	4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	RIPPLY3	P57055	190 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	NLRP11	P59045	1033 aa	Known RBP	4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CBX1	P83916	185 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	ANKDD1A	Q495B1	522 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CMPK2	Q5EBM0	449 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	PAGE2B	Q5JRK9	111 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	PRAMEF7	Q5VXH5	474 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	BNIPL	Q7Z465	357 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	TSEN54	Q7Z6J9	526 aa	Known RBP	4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	ZNF410	Q86VK4	478 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	GPR65	Q8IYL9	337 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	TBC1D21	Q8IYX1	336 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	SFRP1	Q8N474	314 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	ZNF540	Q8NDQ6	660 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CCDC148	Q8NFR7	591 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	OR2L5	Q8NG80	312 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	EXOC6	Q8TAG9	804 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	ANKRD7	Q92527	254 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	TMEM45B	Q96B21	275 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	CNDP1	Q96KN2	507 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	OSBPL10	Q9BXB5	764 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	IL20	Q9NYY1	176 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	LHX3	Q9UBR4	397 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	COPS7A	Q9UBW8	275 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	MIOX	Q9UGB7	285 aa		4.07	□□□□□ -1.76
YBX3-210	ENST00000540975	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.06	□□□□□ -1.76
YBX3-210	ENST00000540975	TLR4	O00206	839 aa		4.06	□□□□□ -1.76
YBX3-210	ENST00000540975	MT-ND3	P03897	115 aa		4.06	□□□□□ -1.76
YBX3-210	ENST00000540975	STMN1	P16949	149 aa		4.06	□□□□□ -1.76
YBX3-210	ENST00000540975	ASMT	P46597	345 aa		4.06	□□□□□ -1.76

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