RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GNAZP19086 355 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 USF1P22415 310 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ATP5A1P25705 553 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SRD5A2P31213 254 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 GALNSP34059 522 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 DEKP35659 375 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SLC1A2P43004 574 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 NUDT6P53370 316 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 MANFP55145 182 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 EEFSECP57772 596 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SESN3P58005 492 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 HERVK_113P63132 956 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ERVK-8P63133 956 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 CDK16Q00536 496 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 TIAL1Q01085 375 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 FAPQ12884 760 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 TRIM25Q14258 630 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF267Q14586 743 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 GUSBP1Q15486 140 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 PDCD2Q16342 344 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 EXOC3L2Q2M3D2 409 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 PGGHGQ32M88 737 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 NCMAPQ5T1S8 102 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 C4orf22Q6V702 233 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 TMEM64Q6YI46 380 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 DGAT2L6Q6ZPD8 337 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 IL17RELQ6ZVW7 336 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 DTX2Q86UW9 622 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 DENND6AQ8IWF6 608 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 KRT78Q8N1N4 520 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 C3orf56Q8N813 242 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 CCDC89Q8N998 374 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ACOT4Q8N9L9 421 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 BBOF1Q8ND07 529 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SRFBP1Q8NEF9 429 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 C17orf47Q8NEP4 570 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 RAB3IL1Q8TBN0 382 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ATG4AQ8WYN0 398 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 CCT6BQ92526 530 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 FIG4Q92562 907 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 TANKQ92844 425 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 PPWD1Q96BP3 646 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 LINGO1Q96FE5 620 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 DOCK7Q96N67 2140 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SFXN2Q96NB2 322 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 MAPKAP1Q9BPZ7 522 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 TBCDQ9BTW9 1192 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 NTMT1Q9BV86 223 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ERVK-6Q9BXR3 956 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ACTR6Q9GZN1 396 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 C12orf65Q9H3J6 166 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 NGBQ9NPG2 151 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SERHLQ9NQF3 203 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 PLSCR4Q9NRQ2 329 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 FAIMQ9NVQ4 179 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 TAS2R13Q9NYV9 303 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 IFNKQ9P0W0 207 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ERVK-19Q9WJR5 959 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SLC22A14Q9Y267 594 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 GPR52Q9Y2T5 361 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 MRPS18CQ9Y3D5 142 aaKnown RBP4.11□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF175Q9Y473 711 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 SNX8Q9Y5X2 465 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 VWFP04275 2813 aa4.11□□□□□ -1.75
SNHG1-214ENST00000540865 WNK1Q9H4A3 2382 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 TCRBV7S2A1N4TA0A589 114 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 AKR1B15C9JRZ8 316 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CLOCKO15516 846 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 MFAP3LO75121 409 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ICOSLGO75144 302 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 HAUS5O94927 633 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 SCELO95171 688 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 GPR75O95800 540 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 AIFM1O95831 613 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 GUCA1CO95843 209 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CSF3P09919 207 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ZSCAN5DPP0CG00 497 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 FCGR2AP12318 317 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 PEPDP12955 493 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ETS1P14921 441 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 PSMB1P20618 241 aaKnown RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 IL11P20809 199 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 HIST1H1TP22492 207 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CPN2P22792 545 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 DPP4P27487 766 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ABCD3P28288 659 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 TLX1P31314 330 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 PTGDSP41222 190 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 RPS13P62277 151 aaKnown RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 DEFA6Q01524 100 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 DHX34Q14147 1143 aaKnown RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CYP1B1Q16678 543 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 RNF151Q2KHN1 245 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 TMEM35AQ53FP2 167 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF793Q6ZN11 406 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 NUP54Q7Z3B4 507 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 PRUNE1Q86TP1 453 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 GGNQ86UU5 652 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 EXOC3L1Q86VI1 746 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms