RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 ZNF350Q9GZX5 532 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 LMAN1LQ9HAT1 526 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 HMG20AQ9NP66 347 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 EQTNQ9NQ60 294 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 MAN2C1Q9NTJ4 1040 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 ZNF443Q9Y2A4 671 aaPredicted RBP9.46□□□□□ -0.89
LMO3-224ENST00000540848 B3GNT3Q9Y2A9 372 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 A3GALT2U3KPV4 340 aa9.46□□□□□ -0.89
LMO3-224ENST00000540848 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 STX11O75558 287 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 UBXN7O94888 489 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 EPPINO95925 133 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 EIF2S1P05198 315 aaKnown RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 RPS4Y1P22090 263 aaKnown RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 CDH3P22223 829 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 MMP11P24347 488 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 POU1F1P28069 291 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 CD38P28907 300 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 STAT5AP42229 794 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 LSSP48449 732 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 GSSP48637 474 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 RACK1P63244 317 aaKnown RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 SIM1P81133 766 aaPredicted RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 RHAGQ02094 409 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 BNIP3Q12983 259 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 SPCS2Q15005 226 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 LTB4RQ15722 352 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 LRIT3Q3SXY7 679 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 MFSD4BQ5TF39 518 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 FAM111BQ6SJ93 734 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 RASSF6Q6ZTQ3 369 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 MRGPREQ86SM8 312 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 RANBP3LQ86VV4 465 aaPredicted RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 CARFQ8N187 725 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 CA13Q8N1Q1 262 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 CLDN22Q8N7P3 220 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 SLC16A11Q8NCK7 471 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 B3GNT7Q8NFL0 401 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 TEX47Q8TBZ9 253 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 PATE1Q8WXA2 126 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 ACOT11Q8WXI4 607 aaPredicted RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 SLC9A6Q92581 669 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 HOXB13Q92826 284 aaPredicted RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 SLC35B4Q969S0 331 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 COL26A1Q96A83 441 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 ZNF578Q96N58 590 aaPredicted RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 CD180Q99467 661 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 KRTAP4-8Q9BYQ9 185 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 TCEAL2Q9H3H9 227 aaPredicted RBP9.46□□□□□ -0.9
LMO3-224ENST00000540848 C14orf105Q9NVL8 296 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 AASSQ9UDR5 926 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 EPHA6Q9UF33 1036 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 MKLN1Q9UL63 735 aa9.46□□□□□ -0.9
LMO3-224ENST00000540848 CACNA1IQ9P0X4 2223 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 KIAA0513O60268 411 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 RPLP0P05388 317 aaKnown RBP9.45□□□□□ -0.9
LMO3-224ENST00000540848 STSP08842 583 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 ADORA3P0DMS8 318 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 RNH1P13489 461 aaKnown RBP9.45□□□□□ -0.9
LMO3-224ENST00000540848 ZNF12P17014 697 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 FPR3P25089 353 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 NOS3P29474 1203 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
LMO3-224ENST00000540848 CSTF2P33240 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
LMO3-224ENST00000540848 TGFBR2P37173 567 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 MAP3K8P41279 467 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 STT3AP46977 705 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 CAPZBP47756 277 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 GIPRP48546 466 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 PCYT1AP49585 367 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 ENTPD1P49961 510 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 PDX1P52945 283 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 C21orf59P57076 290 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 VSX2P58304 361 aaPredicted RBP9.45□□□□□ -0.9
LMO3-224ENST00000540848 CDK5Q00535 292 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 MAP4K2Q12851 820 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 AQP6Q13520 282 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 FAM53BQ14153 422 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 ZNF846Q147U1 533 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 NR1D2Q14995 579 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 PRICKLE4Q2TBC4 344 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 PRTGQ2VWP7 1150 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 TYW3Q6IPR3 259 aaKnown RBP9.45□□□□□ -0.9
LMO3-224ENST00000540848 ZNF730Q6ZMV8 503 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 PLEKHM3Q6ZWE6 761 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 USP43Q70EL4 1123 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 SLC46A3Q7Z3Q1 461 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 ZER1Q7Z7L7 766 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 ZNF595Q8IYB9 648 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 RNF113BQ8IZP6 322 aaKnown RBP9.45□□□□□ -0.9
LMO3-224ENST00000540848 CYP4Z2PQ8N1L4 340 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 COX18Q8N8Q8 333 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 KBTBD8Q8NFY9 601 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 OIT3Q8WWZ8 545 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 OSTF1Q92882 214 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 CDS1Q92903 461 aa9.45□□□□□ -0.9
LMO3-224ENST00000540848 CTHRC1Q96CG8 243 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms