RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 DUSP22Q9NRW4 184 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 GIN1Q9NXP7 522 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 TEKT2Q9UIF3 430 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 KCNE5Q9UJ90 142 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 CBLCQ9ULV8 474 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 CNTRLQ7Z7A1 2325 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 RELNP78509 3460 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 G3V3Y1 287 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 NME4O00746 187 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 NME2P1O60361 137 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 TNFRSF21O75509 655 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 SLC25A12O75746 678 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PDE5AO76074 875 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 IL33O95760 270 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 SP1P08047 785 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 OR12D1P0DN82 309 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 CYP4B1P13584 511 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 ETFAP13804 333 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 NME2P22392 152 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PRIM2P49643 509 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 GZMMP51124 257 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PMP22Q01453 160 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 OC90Q02509 493 aaPredicted RBP11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PLAURQ03405 335 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 LIPEQ05469 1076 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PLCXD2Q0VAA5 305 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 RIPK1Q13546 671 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 ADRM1Q16186 407 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 CYP27C1Q4G0S4 372 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 C1orf146Q5VVC0 180 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 HLA-DQA1Q5Y7H0 255 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 AP1ARQ63HQ0 302 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 OPN5Q6U736 354 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 TMEM156Q8N614 296 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 LSM14AQ8ND56 463 aaKnown RBP11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PSD4Q8NDX1 1056 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 CHDHQ8NE62 594 aaPredicted RBP11.92□□□□□ -0.5
CCDC42-202ENST00000539522 SLC22A8Q8TCC7 542 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 SPPL2AQ8TCT8 520 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 GPR151Q8TDV0 419 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 GRHL3Q8TE85 626 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 DIO2Q92813 273 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 PNPLA2Q96AD5 504 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 RMND5BQ96G75 393 aaPredicted RBP11.92□□□□□ -0.5
CCDC42-202ENST00000539522 ADOQ96SZ5 270 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 KLHDC3Q9BQ90 382 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 RUBCNLQ9H714 662 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 GMPR2Q9P2T1 348 aaKnown RBP11.92□□□□□ -0.5
CCDC42-202ENST00000539522 POMPQ9Y244 141 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 B3GNT3Q9Y2A9 372 aa11.92□□□□□ -0.5
CCDC42-202ENST00000539522 NPIPA5A0A0B4J1W7 369 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 PRORSD1PA6NEY8 169 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 OR6C70A6NIJ9 312 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 NPIPA7E9PJI5 369 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 NPIPB9F8W1W9 429 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 CLIC1O00299 241 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 CDK2AP1O14519 115 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 MGRN1O60291 552 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 FADS1O60427 444 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 FCMRO60667 390 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 DPM1O60762 260 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 ICOSLGO75144 302 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 STAMBPO95630 424 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 ALOX5P09917 674 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 NPIPA8P0DM63 369 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 BMP2P12643 396 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 NAGAP17050 411 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 GPR85P60893 370 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 ACTR3P61158 418 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 FOXO1Q12778 655 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 BNIP2Q12982 314 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 ZNF169Q14929 603 aaPredicted RBP11.91□□□□□ -0.5
CCDC42-202ENST00000539522 SYPL1Q16563 259 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 ZNF766Q5HY98 468 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 PRAMEF20Q5VT98 475 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 SLC25A25Q6KCM7 469 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 BHLHB9Q6PI77 547 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 RTL4Q6ZR62 310 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 GALNTL5Q7Z4T8 443 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 SULF2Q8IWU5 870 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 GPALPP1Q8IXQ4 340 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 TAGAPQ8N103 731 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 RNF148Q8N7C7 305 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 GOLM1Q8NBJ4 401 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 TNIP2Q8NFZ5 429 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 OR52N2Q8NGI0 321 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 OR4C3Q8NH37 302 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 JADE3Q92613 823 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 ZG16BQ96DA0 208 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 COL21A1Q96P44 957 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 SDF2Q99470 211 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 BTBD2Q9BX70 525 aa11.91□□□□□ -0.5
CCDC42-202ENST00000539522 MUC13Q9H3R2 512 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms