RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 KDF1Q8NAX2 398 aaPredicted RBP9.47□□□□□ -0.89
CLPB-210ENST00000539148 ASB15Q8WXK1 588 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 HOXB13Q92826 284 aaPredicted RBP9.47□□□□□ -0.89
CLPB-210ENST00000539148 SDCCAG3Q96C92 435 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 TMCO6Q96DC7 493 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 REXO5Q96IC2 774 aaKnown RBP9.47□□□□□ -0.89
CLPB-210ENST00000539148 ZNF597Q96LX8 424 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 RNF145Q96MT1 663 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 TRNT1Q96Q11 434 aaKnown RBP9.47□□□□□ -0.89
CLPB-210ENST00000539148 LMF1Q96S06 567 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 ITPAQ9BY32 194 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 PCDHAC1Q9H158 963 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 EVA1AQ9H8M9 152 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 A4GALTQ9NPC4 353 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 AGPAT4Q9NRZ5 378 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 GPR83Q9NYM4 423 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 CBLCQ9ULV8 474 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 APC2O95996 2303 aa9.47□□□□□ -0.89
CLPB-210ENST00000539148 EXPH5Q8NEV8 1989 aa9.46□□□□□ -0.89
CLPB-210ENST00000539148 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 A0A0G2JPF8 293 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 OR6C70A6NIJ9 312 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 A8MVJ9 347 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 C1QTNF9BB2RNN3 333 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 HNRNPCL2B2RXH8 293 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 HNRNPCL3B7ZW38 293 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SLC28A2O43868 658 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 REM1O75628 298 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 C1QTNF9P0C862 333 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 HNRNPCL4P0DMR1 293 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 OR12D1P0DN82 309 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SFTPCP11686 197 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 HOXB9P17482 250 aaPredicted RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 PIGAP37287 484 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 RPS6KA3P51812 740 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 CHN2P52757 468 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 EFNA3P52797 238 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 FOXL2P58012 376 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 PSG6Q00889 435 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 ATP6AP1Q15904 470 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 ARHGAP11BQ3KRB8 267 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 DCST2Q5T1A1 773 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 FAM69BQ5VUD6 431 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 TNFAIP8L2Q6P589 184 aaPredicted RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 NUP54Q7Z3B4 507 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 PATL1Q86TB9 770 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 SPPL2CQ8IUH8 684 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 C9orf40Q8IXQ3 194 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 MICU2Q8IYU8 434 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SVOPLQ8N434 492 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SLC16A11Q8NCK7 471 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 CHDHQ8NE62 594 aaPredicted RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 OR10A6Q8NH74 314 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 BBS10Q8TAM1 723 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 PNPT1Q8TCS8 783 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SNRNP27Q8WVK2 155 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 CANT1Q8WVQ1 401 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 LZICQ8WZA0 190 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 TTC9Q92623 222 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 ADIPOR1Q96A54 375 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 GIMAP5Q96F15 307 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 AURKBQ96GD4 344 aaPredicted RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 SGCZQ96LD1 299 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SECISBP2Q96T21 854 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 PKP2Q99959 881 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 UTP23Q9BRU9 249 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 TMEM121BQ9BXQ6 578 aaPredicted RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 YTHDF1Q9BYJ9 559 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 RNF32Q9H0A6 362 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 MTHFD2LQ9H903 347 aaPredicted RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 SDHAF3Q9NRP4 125 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 STMN3Q9NZ72 180 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SLAMF8Q9P0V8 285 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 RPS6KA6Q9UK32 745 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 PACSIN3Q9UKS6 424 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 SAMD4AQ9UPU9 718 aaKnown RBP9.46□□□□□ -0.9
CLPB-210ENST00000539148 ERVK-11Q9UQG0 969 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 IFT52Q9Y366 437 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 NPFFR2Q9Y5X5 522 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 KCNMB2Q9Y691 235 aa9.46□□□□□ -0.9
CLPB-210ENST00000539148 HRKO00198 91 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 WWP2O00308 870 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 HMGN4O00479 90 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ITGA10O75578 1167 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 PPM1BO75688 479 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 SORBS2O94875 1100 aaKnown RBP9.45□□□□□ -0.9
CLPB-210ENST00000539148 IL33O95760 270 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 HPRP00739 348 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ARAFP10398 606 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ACP2P11117 423 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ITGAMP11215 1152 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ETFAP13804 333 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ETS2P15036 469 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
CLPB-210ENST00000539148 ABCD3P28288 659 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 PTGER1P34995 402 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 PCGF2P35227 344 aa9.45□□□□□ -0.9
CLPB-210ENST00000539148 MAP3K8P41279 467 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms