RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PRKAA1Q13131 559 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 TUBB2AQ13885 445 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 IHHQ14623 411 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 IRF3Q14653 427 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 NCF4Q15080 339 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF789Q5FWF6 425 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 VWA2Q5GFL6 755 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ATL3Q6DD88 541 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 KLHL10Q6JEL2 608 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 FAM53AQ6NSI3 398 aaPredicted RBP4.78□□□□□ -1.64
CLIP1-207ENST00000536634 STRADAQ7RTN6 431 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 SLFN11Q7Z7L1 901 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 FAM71AQ8IYT1 594 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 TTC30BQ8N4P2 665 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ZADH2Q8N4Q0 377 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 WDSUB1Q8N9V3 476 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 EXD1Q8NHP7 514 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 PIH1D2Q8WWB5 315 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF582Q96NG8 517 aaPredicted RBP4.78□□□□□ -1.64
CLIP1-207ENST00000536634 PSKH2Q96QS6 385 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 MAP3K3Q99759 626 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 TUBB2BQ9BVA1 445 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 OSGEPL1Q9H4B0 414 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 SLC40A1Q9NP59 571 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 GPATCH2LQ9NWQ4 482 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 RMND1Q9NWS8 449 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 VPS18Q9P253 973 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ATXN10Q9UBB4 475 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 CFAP45Q9UL16 551 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 TRGV8A0A0C4DH27 118 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 OR5K4A6NMS3 321 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 PDZK1P1A8MUH7 402 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 DFFAO00273 331 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 PSMA7O14818 248 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 SLC22A2O15244 555 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CD48P09326 243 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 PRSS56P0CW18 603 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CD1EP15812 388 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 IL4RP24394 825 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 TSFMP43897 325 aaKnown RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 STC1P52823 247 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 DRG2P55039 364 aaKnown RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 GSDMDP57764 484 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 ARF3P61204 181 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 ARF1P84077 181 aaKnown RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CA9Q16790 459 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 HENMT1Q5T8I9 393 aaKnown RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CYB5D1Q6P9G0 228 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 IGFL2Q6UWQ7 119 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 RAB43Q86YS6 212 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 ZNF547Q8IVP9 402 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 AVL9Q8NBF6 648 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CLEC1AQ8NC01 280 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 OR1L3Q8NH93 324 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 NELFBQ8WX92 580 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 NRGNQ92686 78 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 C14orf79Q96F83 325 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 DHTKD1Q96HY7 919 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CNDP1Q96KN2 507 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 DACH2Q96NX9 599 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 MGME1Q9BQP7 344 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 C11orf70Q9BRQ4 267 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 CHCHD6Q9BRQ6 235 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 RAB33BQ9H082 229 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 OR2AG1Q9H205 316 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 MCCC2Q9HCC0 563 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 FAM207AQ9NSI2 230 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-207ENST00000536634 OLAHQ9NV23 265 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 TRIM10Q9UDY6 481 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 SH3BGRL2Q9UJC5 107 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 DNAJC12Q9UKB3 198 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 MAN1B1Q9UKM7 699 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 WDR37Q9Y2I8 494 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 PPIL1Q9Y3C6 166 aa4.77□□□□□ -1.65
CLIP1-207ENST00000536634 TLCD2A6NGC4 264 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 ARHGAP42A6NI28 874 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 PTGES3LE9PB15 166 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 CCL21O00585 134 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 MTX2O75431 263 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 LSM8O95777 96 aaKnown RBP4.76□□□□□ -1.65
CLIP1-207ENST00000536634 KLK3P07288 261 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-207ENST00000536634 IGHV4-38-2P0DP08 117 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GNAZP19086 355 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 CHRNB4P30926 498 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 CA7P43166 264 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 KPNA2P52292 529 aaKnown RBP4.76□□□□□ -1.65
CLIP1-207ENST00000536634 TPI1P60174 286 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GNB1P62873 340 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 IL10RBQ08334 325 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GAGE2BQ13066 116 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 MFAP5Q13361 173 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 EXOC3L4Q17RC7 722 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 ARMC12Q5T9G4 340 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 ALS2CLQ60I27 953 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 SCYL2Q6P3W7 929 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 WDR59Q6PJI9 974 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms